Shewanella khirikhana: STH12_01945
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Entry
STH12_01945 CDS
T06711
Name
(GenBank) Putative multidrug export ATP-binding/permease protein
KO
K18893
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
skh
Shewanella khirikhana
Pathway
skh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
STH12_01945
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_01945
Transporters [BR:
skh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
STH12_01945
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
RsgA_GTPase
MMR_HSR1
AAA_22
AAA_29
AAA_30
AAA
AAA_16
Septin
pXO2-34
Zeta_toxin
Motif
Other DBs
NCBI-ProteinID:
AZQ11045
LinkDB
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Position
2212931..2214769
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AA seq
612 aa
AA seq
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MKTLFRLFERWTTALPESDASQPPSTLFAFCRHYTKGFEIPLICMSVLTAILAMLEVSLF
GFMGQLVDWLANKDPGSLLQDEGAYLLGMTLLVLVAIPILVLLHALIAYQSLLGNYPMSI
RWLAHRYLLKQSIGFYQNEFAGRIATKVMQSALAVRETVMKLLDVAVYILVYFTSMLVII
ASSDWRLMIPMLVWLGIYIGLQIYFIPRLKRVSTEQADARSTMTGRIVDSYTNISTVKLF
SHTQREADYARDAMGGFLDTVYRQMRLVTGLNVSVQIINYVLVFAVAAIAIALWTEQAIT
IGAIAIAVSLALRLNGMSQWIMWEVSSLFENIGTVVDGMNTLSKPTQIKDAPNAKALQVS
KGEIHYQGVSFHYGEGSGVIEGLELNIRPGEKVGLVGRSGAGKSTLVNLLMRFYDVEKGE
IRIDNQAIQEVTQDSLRAHIGMVTQDTSLLHRTIRENILYGRPDASEEELNNAIDRAQAR
EFIEQLSDPSGNHGLDAMVGERGVKLSGGQRQRIAIARVLLKDAPILILDEATSALDSEV
EAAIQESLYQLMEGKTVIAIAHRLSTIAAMDRLIVLDNGKIVEQGSHKELVAHGGIYAQL
WAHQTGGFLGTE
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaccctgtttcgactgttcgagcgctggaccactgccctgcccgaatcggatgct
tcgcagccaccgtcaaccctgtttgctttttgtcgtcattacaccaaaggctttgaaatt
ccgctcatttgcatgtcggtgctcaccgccatcctcgccatgctcgaagtgtccttattc
ggatttatggggcaattagttgattggcttgccaataaagaccccggcagcctgctccag
gatgaaggcgcttatctgcttggaatgaccctgctggtgcttgtcgccattcctatttta
gtgctgttgcacgcgctgattgcctaccaaagcttgctgggtaattaccccatgtcgatt
cgctggcttgcacaccgctatttgctgaagcaaagcattggtttttatcagaatgaattt
gccgggcgaattgcgaccaaggtgatgcagtcggcgctggcggtgcgggaaaccgtgatg
aagctgctcgatgtggccgtctacattctcgtgtatttcacctcgatgctggtcatcatt
gccagcagtgactggcggctgatgatcccgatgttggtatggcttgggatctatattggc
ctgcaaatttactttattccgcggctgaaacgcgtctctaccgagcaggcggatgcgcgt
tccaccatgaccggacgcattgtcgacagctacaccaatatttccaccgtgaagctgttt
tcccacacccagcgtgaagcggattatgcccgcgacgccatgggcggctttttggatacc
gtgtaccggcaaatgcgcctggtgaccgggctcaatgtcagcgtgcaaatcatcaactat
gtgctggtctttgccgtggcggcaatcgcgattgcgctgtggaccgagcaggccatcacc
attggcgccattgccattgcagtcagcctggcgctgcgcctcaacggcatgagtcagtgg
atcatgtgggaagtaagctcgctgtttgaaaacattggcacagtggtggatggtatgaat
accctgtccaaacccacgcaaattaaggacgcccccaatgccaaggcgctgcaggtcagt
aaaggggaaatccactatcagggcgtgagcttccactatggcgaaggcagtggcgtaatt
gaaggattggagctcaatatccgcccaggcgagaaggtgggcctggttggtcgctcgggc
gccggtaagtcgaccctggtgaacctgctgatgcgcttttacgatgttgagaaaggcgaa
atccgtatcgataatcaagcgattcaggaagttactcaggattcgctgcgggcccacatc
ggcatggtgacccaggatacttcgctgttgcaccgcactattcgcgagaacatcctttat
ggtcgtcccgatgccagcgaagaagaacttaacaatgccatcgaccgggctcaggcacgg
gagtttatcgagcagctaagcgacccatcaggcaaccacggtttggatgccatggtgggc
gagcgtggcgtgaagctttccggcggccagcgccagcgcattgccattgcccgggtgctg
ctgaaagacgcgcccattctgatcttggatgaagccacctcggcgctcgactcggaagtg
gaagcggcgattcaggaaagcctgtatcaactgatggaaggtaaaaccgtgattgccatt
gcccaccgactgtcgaccatcgccgccatggatcgccttatcgtgctcgataacggcaaa
atcgttgaacaaggcagccacaaagagctggtcgcacacggcgggatttatgcccagctg
tgggcacatcagactggcggtttcctcggcaccgagtaa
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