Shewanella khirikhana: STH12_01963
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Entry
STH12_01963 CDS
T06711
Symbol
dctB
Name
(GenBank) C4-dicarboxylate transport sensor protein DctB
KO
K10125
two-component system, NtrC family, C4-dicarboxylate transport sensor histidine kinase DctB [EC:
2.7.13.3
]
Organism
skh
Shewanella khirikhana
Pathway
skh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STH12_01963 (dctB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
skh01001
]
STH12_01963 (dctB)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
skh02022
]
STH12_01963 (dctB)
Enzymes [BR:
skh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
STH12_01963 (dctB)
Protein kinases [BR:
skh01001
]
Histidine kinases
NtrC family
STH12_01963 (dctB)
Two-component system [BR:
skh02022
]
NtrC family
DctB-DctD (C4-dicarboxylate transport)
STH12_01963 (dctB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HATPase_c
dCache_1
HisKA
dCache_3
sCache_3_2
OmpH
HATPase_c_5
DUF2645
Motif
Other DBs
NCBI-ProteinID:
AZQ11051
LinkDB
All DBs
Position
2222275..2224077
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AA seq
600 aa
AA seq
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MPLTPTVKRRLKNTALVLVGLLLVLYLTWSWHIRSGMAELSENSQKQLSELVSLLDSLLL
RFETIPHVLSTNPMLADALLDQRNQEKISRLNLYLEELRHITEASDIYLIDALGVAVAAS
NWQQPYSFVGQDYSFRPYFTEAIAGGQGSYYAVGTASNRRGFYFSFPVLDKGGVLGAIVV
KLDLTDIETQAAGVAQAGQYDFIITDPDDIVFASNRPEWRLTSLTPLTQSKQYALNASKR
YAKRQISELAIHPAYRGVGKALSTYRIGKGAEAADYLDTAILMTKAGWRVHVLSPLGEVY
AALYQVLLLAATCYGLLLLFTLLQYERRRSLARMQQSRDELERRVEERTAELQAANTQLK
DTQDELIQAAKLTVVGSLSASINHELNQPLAAIRSYTQNTQTFLERDMPQRARENLAIIL
ELTDRMAEIVGQFKSFTRKSQGKDRAVALDECLAQALTIVQPEIDKQQVALSVSADRDDL
RVWCDGTRLQQVLVNLISNALTAMAQSEHKRLHISLIEGDPLLIRIQDSGPGVRDSLMEK
IFEPYYTTSERQGLGLGLSISRRMIESMQGDIRVSNAPEGGAIFDIALPAYSPEKAQYES
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgccgctgacgcccacggtaaaacgacgtttgaaaaacacagcactggtgcttgttggc
ctgctgctggtgctttacctcacctggtcatggcatatccgcagtggcatggccgagctg
tctgaaaattcacaaaaacagctcagtgaactggtgagtttgctcgacagcctgctgctg
cgctttgaaaccatcccccatgtgctctccaccaaccccatgctggccgacgcgctgctg
gatcagcgcaatcaggagaaaatcagccgcctgaatctgtatctggaagaactgcgccac
attaccgaggcatcagatatttaccttatcgatgccctgggcgtggccgtggcagccagc
aactggcaacagccctattcgtttgttggccaggactactccttccgcccgtattttact
gaggctattgccggtggtcagggcagttattacgccgtcggcaccgcctcgaaccggcgc
ggcttttacttctcgtttccggtactggataaaggcggcgtgctgggcgccattgtggtg
aagctggatttgaccgatatcgaaacccaggccgccggggtcgcccaggcgggccagtac
gattttattatcacggacccagatgacatcgtttttgcctccaaccggccggaatggcgc
cttacgtccctcacgccgctgacccaaagcaagcaatacgccctcaatgccagtaagcgc
tatgccaaacggcaaatcagcgagcttgccatacatccggcttaccgcggcgtaggtaaa
gcgctcagcacctatcgcatcggcaaaggcgccgaggcggcggattatctggataccgcg
attttgatgaccaaggccggctggcgggtacatgtgctgagccctttgggcgaggtgtac
gccgccctgtatcaggtgttgctgcttgcggctacctgctatggcctgctgctgctgttt
accttgttgcagtacgagcgccgtcgaagcctcgccaggatgcagcagtccagggatgag
cttgagcggcgggtcgaagagcgtaccgccgagttgcaagcggccaacacccaattgaaa
gacacccaggatgagctgatccaagcggccaagctcaccgtggtaggcagcctgtcagca
agtattaaccatgagcttaatcagccacttgccgcgattcgcagctacacccaaaacacc
cagaccttccttgagcgggacatgccacagcgggcccgcgagaatctggccatcattctt
gaactcaccgaccgcatggccgaaattgtcggccaattcaaaagctttacccgtaaaagt
cagggtaaggatcgggcggtggcgctggatgaatgtctggcgcaggcactgaccatagtg
cagcccgaaatcgacaaacagcaggtggcactgagtgtcagcgccgatcgcgacgatctc
agggtgtggtgcgacggcacccgcttgcagcaggtactggttaaccttatcagcaacgcc
ctgacggccatggcccaaagtgagcacaagcggctgcacatcagtctgattgaaggcgat
ccactgcttattcgcattcaggattcaggccccggtgtgcgcgacagcctgatggaaaaa
atattcgaaccctattacaccaccagtgagcggcagggactgggccttggcctgtcgatt
tcccgccgcatgattgaatccatgcagggggacattcgcgtctccaatgcccccgaaggc
ggcgccattttcgatatcgccctgcccgcttacagcccagagaaggcacaatatgagtct
tga
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