Shewanella khirikhana: STH12_02003
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Entry
STH12_02003 CDS
T06711
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
skh
Shewanella khirikhana
Pathway
skh00521
Streptomycin biosynthesis
skh00523
Polyketide sugar unit biosynthesis
skh00541
Biosynthesis of various nucleotide sugars
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01250
Biosynthesis of nucleotide sugars
Module
skh_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
STH12_02003 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
STH12_02003 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
STH12_02003 (rmlC)
Enzymes [BR:
skh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
STH12_02003 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AZQ11091
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Position
complement(2274025..2274555)
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AA seq
176 aa
AA seq
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MQVIATALNEVKLIVPKVFRDDRGYFFESWQQQKFAELVAPIHFVQDNHSLSVKGTLRGL
HWQEQHPQDKLISVLQGDIFDVAVDIRKDSPTYGKWVGEILSSDNHKQMFIPKGFAHGFY
VLSETAMVSYKCSDFYHPASERCIRWDDPVLAIHWPLSSSPLISEKDNLGMAFVDL
NT seq
531 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtaatagctactgcactcaatgaggtaaagcttattgtcccaaaggtgtttcgg
gatgatcgcgggtatttttttgaatcctggcaacagcagaaatttgccgagttagtggca
cccattcattttgtgcaggacaaccactcactttcagttaaaggcacactgcgagggctg
cattggcaggagcagcatccgcaggataagttgatatctgttttgcagggtgacatcttt
gatgtcgcggtggatatccgcaaagactcgccgacctatggcaagtgggttggagagata
ctgtccagcgataaccataagcagatgttcatccctaaaggttttgcccacggtttttat
gtgctttcagaaactgccatggtgagttacaaatgcagcgatttttatcatccagcatcc
gagcgttgtatccgctgggatgaccccgtacttgccatacactggccgctctcatcgtcg
ccacttatttccgagaaagataacttgggtatggcttttgtggatttgtaa
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