Shewanella khirikhana: STH12_02008
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Entry
STH12_02008 CDS
T06711
Symbol
pglF_1
Name
(GenBank) UDP-N-acetyl-alpha-D-glucosamine C6 dehydratase
KO
K24300
UDP-N-acetylglucosamine 4,6-dehydratase [EC:
4.2.1.135
]
Organism
skh
Shewanella khirikhana
Pathway
skh00541
Biosynthesis of various nucleotide sugars
skh00552
Teichoic acid biosynthesis
skh01100
Metabolic pathways
skh01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
STH12_02008 (pglF_1)
00552 Teichoic acid biosynthesis
STH12_02008 (pglF_1)
Enzymes [BR:
skh01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.135 UDP-N-acetylglucosamine 4,6-dehydratase (configuration-retaining)
STH12_02008 (pglF_1)
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GFIT
Motif
Pfam:
Polysacc_synt_2
Epimerase
RmlD_sub_bind
CoA_binding_3
GDP_Man_Dehyd
3Beta_HSD
KR
PglD_N
adh_short
C2185-like_N
Glyco_transf_99
Motif
Other DBs
NCBI-ProteinID:
AZQ11096
UniProt:
A0ABM7DBZ9
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All DBs
Position
complement(2279310..2281247)
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AA seq
645 aa
AA seq
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MAFLQLLFSLNRFQKRIVSVVLDSVFLVFSFWSALVMRLDTFDVFSNSQYWLLVTFVCPL
SIFAFVKLGLYRAVLRYLSAQAMTAISLGIFISTIAMLAFAYVLQVDLPRTVPFIYAVFS
LVLVGGARGIMRSMVGIGLNRRGEPVIIYGAGVSGRQTALALAQSHEYHPFAFVDDDETF
HGTVIQGLHVHSPSIIRKLIKQKQATRVLLAMPSASRARRQQILQTLVPLSVKVMTLPSM
ADLVSGNKLFSDVKEVEIEDLLGRDAVAPRTDLMAANITAKAVMVTGAGGSIGSELCRQI
IRLAPSKLVLFELSEFGLYSIDRELHAIKADLGLTVDIFPMMGSVQRQNRVQAVMEAFNV
QTVYHAAAYKHVPLVEHNVVEGVRNNVFGTLYTAQAAIATGVETFVLISTDKAVRPTNVM
GTTKRMAELVLQALSKQNTSTRFCMVRFGNVLGSSGSVVPLFRKQIANGGPVTVTHPEIT
RFFMTIPEASQLVIQAGAMGRGGDVFVLDMGQSVKIVDLARKMIRLSGFEVKDEHNPDGD
IEIQFSGLRPGEKLYEELLIGDNVEGTEHERIMTANEVCLMWDELKVLLDKLDMACHAFD
HETIRELLLKAPTGFNPTDGICDLVWMNKQKDLNDAKVLSIKVGV
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atggcttttctacaactcttgttttctcttaatcgatttcaaaaacgcattgttagtgtg
gtcctagactctgtgtttttggtcttctcattttggtctgcattggtgatgaggcttgac
acattcgacgtgttttcgaatagtcagtattggttgttggttacattcgtgtgcccatta
agtatttttgcatttgttaagcttggtttgtatcgggcggtattgcggtatctaagcgct
caagcgatgacagctatttctctaggtatttttataagcacgatagctatgttagccttt
gcttatgtgctacaagtggatctccctcgtacggtaccttttatttatgccgtattctca
ctggtactcgttggtggagcaagggggattatgcgctcaatggtcggtattggtttaaat
cgtcgcggtgaacctgtgattatttatggagcaggagtgagcgggagacaaacagcttta
gcattagcccagagtcatgaatatcacccgtttgcttttgttgacgatgacgaaacattt
catggtactgttattcagggacttcatgttcattcaccgtcaatcattcgtaaactaatc
aagcaaaagcaagccactagggttcttctagcgatgcccagtgcgagtagggctcgtcgt
caacagatacttcaaactcttgttccgctttccgtaaaggtaatgactctcccttcaatg
gcggatttggtgagtggtaataaactttttagtgatgtgaaagaagttgaaattgaggac
ttgctagggcgtgatgcagttgctccaagaaccgacttaatggcagcaaatattacagcg
aaagctgtgatggttactggagcggggggctccataggctcggaactttgtcggcagatc
atacgccttgcaccgagtaaattggttttgtttgagctttctgagttcgggctttattcc
atagatagagagttgcatgctataaaagcagatctcggcctaacggtggatatatttcct
atgatgggctccgtacagcgtcaaaatcgtgttcaagccgttatggaggcatttaacgta
cagactgtttaccatgcggcagcctataagcatgtacctttggtagagcacaatgttgta
gaaggcgtgcgtaacaatgtgtttggtaccctctacacagctcaagcagcaatcgcaaca
ggtgttgaaacgtttgttcttatttctaccgataaagcggtccgacccaccaacgtaatg
ggaaccactaaacggatggcagagcttgtgcttcaggcgctgtcaaaacaaaatacatcg
acgcgcttttgtatggttcggtttggtaacgtgctcggctccagtggttctgtagttcca
ttattccgtaaacaaattgccaatggtggcccggtcacagtaacccatccagagatcacg
cgtttctttatgacaattccagaggcgtcccagcttgtcatccaggcaggtgcaatgggg
cgtggtggagatgtgtttgtgctcgatatggggcagtcggttaagattgtagacctcgct
cggaaaatgatacgtctatctggttttgaggtaaaagacgagcataatcctgacggcgat
atcgaaatccagttcagcggtcttcggccaggtgagaaactttatgaggagctgctgatt
ggtgacaatgttgaaggtacggaacatgagcggatcatgactgcaaacgaagtgtgcctc
atgtgggatgagcttaaagtcttgcttgataaacttgatatggcctgtcatgcatttgac
catgagactatcagagagctgcttctcaaagcaccaacaggcttcaatcccaccgatggt
atttgcgatctcgtttggatgaataaacagaaagatttaaacgatgctaaagttttgtct
ataaaggtcggcgtttaa
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