Shewanella khirikhana: STH12_02030
Help
Entry
STH12_02030 CDS
T06711
Symbol
kpsD
Name
(GenBank) Polysialic acid transport protein KpsD precursor
KO
K01991
polysaccharide biosynthesis/export protein
Organism
skh
Shewanella khirikhana
Pathway
skh02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STH12_02030 (kpsD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_02030 (kpsD)
Transporters [BR:
skh02000
]
Other transporters
Pores ion channels [TC:
1
]
STH12_02030 (kpsD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SLBB
SLBB_2
Poly_export
Caps_syn_GfcC_C
Motif
Other DBs
NCBI-ProteinID:
AZQ11118
LinkDB
All DBs
Position
complement(2303069..2305813)
Genome browser
AA seq
914 aa
AA seq
DB search
MLQQLKRLMIASVSALVLVGGPSAAITPSPQMIEQFKNLPKSEQERIARQYGIDPSMLGG
TTQGSKRLEQPELMSERLSERDLDKDKEGKKKSKDDSVDFSQDASKSELKRFGYELFAGE
PSTFAPVSDAPVPAEYQIGPGDTLNVQLYGKENKNFSLTVGRDGTVQFPDLGPISLVGMS
FSEARSLLLDKIAKSMIGIQASITMGELRSIRIFVAGDAYKPGSYTVSSLSTITQALFVS
GGINEIGSLRNIQLKRNGKLIGSLDLYDLLLKGDASKDLRLQSGDVVFIPAVGGLVSVDG
EVRRPAIYELKKGETVKDVVSMAAGLMPGAYPKQSVLERFGSDGLKTLINLDLTSTKGLS
VSAKPGDYIRVKSASAQFDNAITVVGAVVRPGKYQWAQGKRVSDILPSIWGDLEINADLD
FGLVVREVNQFGDIEVLQFAPGHAISTPASSENLQLAARDKIVIFSFSDDTQNRYELNRL
VKSRVAKVSELKGDSLIQGDIFKAGFSSINQKKLKSRTELAGVVIDQDKAEEEQLVADEV
AKMLANLFDDRDLIRLSGVMSREELLYPVVSKLTSQSRAGQGAKLVSVAGQVRHPGVYPL
SQNASVKSLVKAAGGLKEGAYTVRAELSRTNIDANGSTLEHINVDLAAALSGGEENLRLQ
GRDSLTVMTTPEWQETQTVEIRGEVKFPGVYSIRRGETLSEVIARAGGYTDFAYLPSAVF
VRESVRKQEQIEIKKLADQLRRDLATRGVSKDGNVLNYSEAQLMLKDLEMIEAVGRLVVD
LPALSVGVTEADIQLEQDDVLYVPSTRQTIAVMGEVQHPTSHRYKDGITLQQYIAMSGGA
RKRADDDRTYVIKANGSVMLPRGSFWFSAEDELMAGDTIIVPLDTEYKDNLTLWSQITQI
IYNTAVAVATISGL
NT seq
2745 nt
NT seq
+upstream
nt +downstream
nt
gtgttacaacaactaaaacgactgatgattgccagcgttagtgcgctggttttggttggg
ggaccaagcgcggcgataactccgtcaccgcagatgattgaacagttcaaaaacttgcca
aagtctgagcaggagcgcattgcacgtcagtacggtatcgatccgtccatgcttggcggc
actacccaaggtagcaagaggcttgaacagccagagttgatgtccgagaggctatcagag
cgggatttggacaaagacaaagaaggcaagaagaaatctaaagacgactccgtagatttc
tcacaggacgcgtcaaaaagcgagcttaagcgttttggatacgaactgtttgccggagag
ccttccacttttgcgccagtttcggatgcgccggtgccagcggaatatcaaattggcccg
ggcgacacactgaatgttcagctctacgggaaggaaaataagaatttcagcctgactgtt
ggccgtgacggtacagtgcagttccccgatttaggccccatttccttggttggtatgagt
ttctccgaagcccgtagcctgctgctggataagattgccaagtcgatgattggtattcag
gccagcatcaccatgggagagctgcgctcaatccgtatcttcgtggctggtgatgcctat
aaacctggttcatacacggtatccagcctgtcaactatcacccaggcgctgttcgtttcc
ggtggtatcaatgagattggctcactgcgtaacattcaactcaagcgaaacggtaagttg
attggttcacttgacctttacgatttgctcctcaaaggtgatgcgtccaaagaccttcga
ctgcaatccggcgacgtggtgtttattcctgccgttggcggtttggtatctgtcgatgga
gaagtacgtcgcccggcaatatacgagcttaaaaagggtgaaacggtaaaggatgtggtc
agcatggcagcaggactcatgcctggtgcttaccccaaacaaagcgtgctagaacggttc
ggttcagacggtcttaaaacacttatcaatctggatttaacttctaccaaaggtttgtcg
gtttctgccaagccaggcgattatatccgggttaaaagtgcgtcagcccaatttgataat
gccatcacagtcgttggtgccgtggtacgcccgggtaaatatcagtgggcacaaggtaag
cgcgtaagtgacattcttccttcgatttggggggatttggagattaacgctgatcttgac
tttggtttggttgttcgcgaagtaaatcagttcggagatattgaggtattgcaatttgcc
cccggacacgcaatctcaactccggcatcctctgaaaaccttcagctagctgccagagat
aaaattgttatcttcagcttcagtgatgatactcaaaaccgatatgagctgaatcgtctg
gtaaagagccgtgttgccaaggtcagtgagcttaaaggtgactcgcttatccaaggggat
atctttaaagcaggtttcagtagcatcaatcagaagaagctcaagtcgcgcactgaattg
gctggggttgtcattgaccaggataaggcagaagaagaacaactggttgccgacgaagtg
gcaaaaatgctggccaatttgttcgatgaccgcgacctaattcgtctctctggggtgatg
agccgtgaagagttgctctatcctgttgtttctaaactgaccagtcaaagccgggcaggg
cagggcgcaaagcttgtctccgttgctggccaggttcgtcaccctggtgtctatccgttg
agtcaaaatgcgtcggtcaagtcgcttgtaaaggccgctggtgggcttaaagaaggcgct
tacactgtacgtgctgagttgagtcgtactaatatcgacgcgaacggttctactctggag
cacatcaacgtcgatttagcagctgctctctcgggaggcgaagagaatctgcgtctgcaa
gggcgagacagcctcactgtaatgacaacccccgaatggcaggaaactcaaaccgtagaa
attcgcggcgaagtgaagttccctggtgtttacagtattcgccgcggtgagacactgtcg
gaagtgattgcaagggctggtgggtacaccgactttgcctacttgccttcggcggtattt
gtgcgtgagagcgtgcgtaagcaagagcagatcgaaattaaaaagctggctgaccaactg
cgccgtgatctggcaacccgtggcgtttccaaagatggaaacgttctgaactacagcgaa
gctcagttaatgctcaaagaccttgagatgattgaagctgtaggccgtcttgtggtcgat
ctgcccgcgctgtcagtaggcgtaacagaagccgatatccaactcgagcaggatgacgtg
ctttatgtgccatcaactcgccaaaccatcgctgtgatgggtgaagttcagcatcccacc
tcccatcgttacaaagatggcatcacactgcagcagtatatcgccatgtcaggtggcgcc
cgtaagcgtgccgatgatgatagaacatatgtaatcaaagcaaatggttcggtaatgctg
ccgagaggctcattctggttcagcgctgaagatgaactcatggctggtgacaccatcatt
gtgccattggatacagagtacaaagacaaccttacactctggagccagattactcagatc
atctacaacaccgccgtggcagtagcaactatttcaggactctaa
DBGET
integrated database retrieval system
