Shewanella khirikhana: STH12_02119
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Entry
STH12_02119 CDS
T06711
Symbol
ttgW
Name
(GenBank) putative HTH-type transcriptional regulator TtgW
KO
K18301
TetR/AcrR family transcriptional regulator, mexJK operon transcriptional repressor
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_02119 (ttgW)
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
skh01504
]
STH12_02119 (ttgW)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
STH12_02119 (ttgW)
Antimicrobial resistance genes [BR:
skh01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
STH12_02119 (ttgW)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TetR_C_7
TetR_N
LacI
Mug62
HTH_3
HTH_22
HTH_Tnp_1_2
HTH_10
UPF0122
HTH_40
Motif
Other DBs
NCBI-ProteinID:
AZQ11206
UniProt:
A0ABN5TVI1
LinkDB
All DBs
Position
complement(2396873..2397493)
Genome browser
AA seq
206 aa
AA seq
DB search
MSSTPNNSLSRSEQKRMAILESAIELFCGQGFPNTSMDEVAKKAGVSKQTVYSHFGNKDE
LFVASIESKCVMHDITPDMLADVVHPERVLTQFAARFGAMIVSEEALTVYRACVSQADTH
PEVSKLYFAGGPSVMLALLSDYFRRVEAEGKYRFGDTRHAAIRLCLMLFGERRLRLELGM
PIEDSDEERSRYLDETINMFLRAARE
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atgagttccaccccaaacaacagccttagccgcagtgagcaaaagcgtatggccatcctg
gaatcggccatcgaactcttctgtggtcagggttttccgaataccagtatggatgaggtg
gctaaaaaggccggtgtctccaagcagaccgtctattctcattttggtaacaaagacgag
ctgtttgtggcttccatcgagtccaaatgtgtgatgcacgacatcaccccggacatgctg
gcagatgtggtgcatcctgagcgggtactgacgcagtttgctgcccgctttggtgccatg
attgtcagtgaagaagcgctgacggtgtaccgcgcctgtgtgtctcaggccgacactcac
cctgaagtgtcgaagctgtattttgccggtggcccgagtgtgatgctggcgctgctgagt
gactactttcgccgggtcgaggccgagggcaagtaccgctttggcgatacccgccatgcc
gccattcgtctgtgtctgatgttgtttggtgagcggcggctaaggcttgagctcggcatg
ccgattgaagacagcgacgaagagcgcagccgctatctcgacgagaccatcaacatgttt
ttgcgtgcggcaagggaatga
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