Shewanella khirikhana: STH12_02183
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Entry
STH12_02183 CDS
T06711
Symbol
comR
Name
(GenBank) HTH-type transcriptional repressor ComR
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_02183 (comR)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
STH12_02183 (comR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
TetR_C_13
TetR_C_11
SAM_KSR1
Motif
Other DBs
NCBI-ProteinID:
AZQ11269
UniProt:
A0A3Q9E957
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All DBs
Position
2496081..2496659
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AA seq
192 aa
AA seq
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MRSAEFDREHVLRQAMQAFMVKGYSKTSMQDLTRATGLHPGSIYCAFENKRGLLLAAIAQ
YQADRMAQFQAYFPEGGKVVDGLAAYLANIVAECQCGADKACLLTKSLNELAEQDEEIRA
LLCQSLGTCQQGLARQFQRAIDNQEMPANQSSIERAEYFVMGVYGLRTLAQTHPSEATLT
RLADKLLKDSCN
NT seq
579 nt
NT seq
+upstream
nt +downstream
nt
atgcgcagcgccgaatttgaccgagaacacgtgcttcgccaggccatgcaggcctttatg
gtgaagggctacagcaaaaccagcatgcaggatttaacccgggcaacaggcttgcacccg
ggctcgatttattgcgccttcgaaaacaagcgtggtctgctgctggcggccattgcccag
tatcaggctgaccgcatggcgcagtttcaggcgtattttcccgaaggcggcaaggtggtc
gatggcttggccgcttatctggccaatatcgtggccgaatgccaatgcggggccgacaag
gcctgtctgctgaccaaatcattaaacgagctggccgagcaggatgaagaaatccgcgca
ctgctgtgtcaaagtctgggtacctgccagcagggactggccaggcagtttcagcgcgcc
attgataatcaggaaatgcctgccaatcaaagcagtatcgagcgggccgagtattttgtg
atgggggtttatgggctgcggactctggcgcagactcacccgtccgaggccaccctcacc
cggctggccgacaagctgttaaaagacagctgtaactga
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