Shewanella khirikhana: STH12_02194
Help
Entry
STH12_02194 CDS
T06711
Name
(GenBank) hypothetical protein
KO
K08676
tricorn protease [EC:3.4.21.-]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
skh01002
]
STH12_02194
Peptidases and inhibitors [BR:
skh01002
]
Serine peptidases
Family S41: C-terminal processing peptidase family
STH12_02194
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S41
Tricorn_C1
PDZ_Tricorn
PD40
PDZ_6
PQQ_3
DPPIV_N
Beta-prop_EML_2
SGL
PDZ_2
Peptidase_S9_N
DUF4221
WD40_Prp19
WD40_WDHD1_1st
PDZ
Beta-prop_IFT122_1st
WD40_MABP1-WDR62_2nd
Motif
Other DBs
NCBI-ProteinID:
AZQ11280
LinkDB
All DBs
Position
complement(2509687..2512938)
Genome browser
AA seq
1083 aa
AA seq
DB search
MKLRLSVAGCLLALGTFGLPAYGSEGYFRFPELHNDTLVFTAEGDLWLGRVGSEHASRLT
TQAAEETQARISPDGKQLAFVANYDGTDEVYVMPISGGEPKRVSFENARVRLQGWSQDGK
VLYSTNNVFGPANYWVLRLADPVSLTTEDLPLADAIEGALDSSGDYLYFVRFGLQATGDN
AKVYRGGARGELWRYKLGSKTEAERLLAGHEGSLRQPMFWDGRLYFISDADGNDNLYSVT
PDGQDLKQHSQYKDFQIRAARINNGKLIFQMGADIRTLDIASGKDSVLPLQLTSDFPARR
ARWVNNPMDYVSDVRFAPSGDKAVITARSQVAIAATDGRRLVQISSPADSRVRNAVLGSE
GKYVYGISDASGEQELWRFPADGSEGAVQLTKDAKTMRMSLVASPDGRYLAHDDYEGNLY
LYDIKKGSNSLIVSGHQGLGPYGDIIWSPDSRFIALSMNEMGKQRQQVVLYSLEEKKQHS
LTSDKYESFSPAFSRDGQWLYFLSNREFNATPGSPWGDRNMGPVFDRRTGVFALALSADA
RFAFERPTELSTPVPEKSEGELKLKVDWDGIQGRLWQVPVGTGNFSNLSLADGKLYVLDG
DIAGQQSSLKVAKFDGLSPKLETFADDIGNYVLSADGKKLLLSKKSNGKELLIVDAGDKL
PGDLANARVRTQDWQMELSPKAEWRQMFDDAWLMHRDSFFDKKMRGVDWQATRNKYLPLL
ERVTDRHELNDLFMQMMGELDALHSQVRGGDMPRDANTPNPAGLGARLAQSSQGVKIEHI
LKTDPELPNMAAPLARPGVDAREGDLITAINGRKVSTVADVASMLRNQGGKQVLLSLKRG
SKAVQTVVWPVSVNEEDKLRYQDWVTHNASKVSKDSDGKIGYLHLYAMGAGDIASFAREF
YANYDKEGLIIDVRRNRGGNIDSWVIEKLLRKAWAFWQPTHGDASTNMQQTFRGHLVVLT
DQLTYSDGETFSAGIKALGLAPLVGKQTAGAGVWLSGRNSLTDRGMARVAEYPQYAIDGR
WVIEGRGVSPDVEVDNLPYATFTGFDAQLAKGVEMLKARITAEPVPALKAKPMPAKGEAA
DIK
NT seq
3252 nt
NT seq
+upstream
nt +downstream
nt
atgaaactgcgtctctccgttgccggctgcctgctggccctgggcacctttggtctgcca
gcctacggcagtgaaggttacttccgcttccccgaactgcacaacgacaccctggtgttc
accgccgaaggcgatctgtggcttggccgtgttggcagtgaacatgccagccgtctgacc
acccaggccgccgaagaaacccaggcgcgcatttcccccgacggcaagcaactggccttt
gtggccaattatgacggcaccgatgaagtctatgtgatgcccatcagcggcggtgagccc
aagcgcgtcagcttcgaaaacgcccgcgttcgcctgcagggctggagtcaggacggcaag
gtgctgtattccaccaataatgtctttggcccggccaattactgggtgctgagacttgcg
gatcctgtgtcgctgacgaccgaagatctgccgctggccgatgccattgaaggcgcgctc
gacagcagtggcgactatttgtatttcgtgcgttttggtctgcaggccacaggtgacaat
gccaaggtgtatcgcggcggtgcccgcggagagctgtggcgctataaacttggcagtaaa
acagaagccgagcggctgctggctggtcatgaaggctctttgcgccagccaatgttctgg
gatggacgcctctatttcatcagcgatgccgatggcaacgacaacctctattcggtgacg
ccggatggtcaggatcttaagcagcacagccaatacaaagacttccagatccgcgccgcc
cgcattaataacggcaagctgattttccagatgggcgccgatatccgtacgctggatatt
gccagcggcaaagatagcgtgctgccactgcaactgacgtcagatttccccgcccgccgt
gcgcgctgggtaaataaccccatggactatgtcagcgacgtgcgttttgccccctctggc
gataaagccgtgattaccgcgcgcagccaggtggccattgccgccaccgatggtcgccgt
ctggtgcaaatcagctcgcctgccgacagtcgggtgcgtaacgccgtgcttggcagcgaa
ggcaagtatgtctacggcataagcgatgcctccggcgagcaggagctgtggcgcttcccg
gccgatggcagtgaaggcgcagtgcagctgaccaaggatgccaaaaccatgcgtatgagc
ctggtagcctccccggacggccgctatctggcccacgacgactatgaaggcaacctgtac
ctgtatgacatcaaaaaaggcagcaacagcctgattgtctccggtcatcagggcctgggc
ccctacggcgacatcatctggtcgccggacagccgctttattgcgctatcgatgaatgaa
atgggcaagcagcgccagcaagtggtgctctatagcctggaagagaagaagcagcacagt
ctcaccagcgacaagtatgaatccttctcgccagccttcagccgcgatggtcagtggctc
tacttcctgtcgaaccgtgaatttaacgccaccccaggctcgccatggggcgatcgcaac
atgggccctgtgtttgaccgccgcaccggcgtgtttgcgctggccttaagcgccgatgcc
cgttttgcttttgagcgtccaacagagctcagcacccccgtgcctgaaaagtccgagggc
gaacttaagcttaaggtggactgggacggtatccaaggccgcctgtggcaagtgcctgta
ggtacggggaatttcagtaatctgagtcttgccgatggcaagctttatgtgctcgatggc
gatatcgccggtcagcagtcgtcactgaaggtcgccaagtttgatggtctttcgcccaag
cttgagacctttgccgacgatatcggcaactatgtgttgtcggcggatggtaaaaagctg
ttgctgtcgaaaaagagcaatggcaaagagctgctgattgtggatgcaggcgacaagctg
cccggggatctggccaacgccagagtacgtacccaggattggcagatggagctgagcccc
aaggccgaatggcgccagatgttcgacgatgcctggttgatgcacagagattctttcttc
gacaagaagatgcgtggcgtcgattggcaagctacccgcaacaagtatctgccactgctg
gagcgagtcactgaccgccatgaactgaacgatctctttatgcagatgatgggcgagctg
gatgcactgcactcacaggtgcgtggcggcgatatgcccagggatgccaatacgccaaat
ccggccgggctgggtgcccgcctggcgcaaagctcccagggcgtgaagattgagcatatt
ctgaaaaccgatccagagctgcccaacatggcggcgccgctggcccgtcccggtgtggac
gcccgcgaaggcgaccttattaccgccatcaatggccgtaaggtgagcacagtggcagac
gtggcctccatgctgcgcaatcagggtggtaagcaggtgctgttgtcattgaagcgcggc
agtaaggcggtgcaaaccgtcgtgtggcctgtgtctgtgaacgaagaagacaagctcaga
tatcaggactgggtaacccataacgcttcaaaggtgagcaaggacagcgacggcaagatt
ggctatctgcacctgtacgccatgggcgccggcgacattgcttcctttgcccgcgaattc
tacgccaactatgacaaagaggggctgattatcgatgtgcgtcgtaaccgcggcggcaat
atcgacagctgggtgattgaaaaactgctgcgtaaggcctgggccttctggcagccgacc
cacggcgatgcctccaccaacatgcagcaaaccttccgaggccatctggtggtgctgacc
gaccagctgacttactcagacggtgaaaccttctctgccggtatcaaggcactgggtctg
gcgccgctggtgggtaagcaaactgccggtgccggtgtctggctctctggccgtaactcg
ctgactgaccgtggtatggcgcgggtggccgagtatcctcagtacgccatcgatggtcgc
tgggtgattgaaggccgtggcgtgagcccggatgtcgaagtcgacaacctgccttatgcc
accttcacggggttcgatgcccagctagccaagggcgttgagatgctgaaagccagaatc
accgctgagcctgtgcctgcgctcaaagccaagcctatgcctgccaagggtgaggctgcg
gacatcaagtaa
DBGET
integrated database retrieval system
