KEGG   Shewanella khirikhana: STH12_02198
Entry
STH12_02198       CDS       T06711                                 
Symbol
ygdH
Name
(GenBank) LOG family protein YgdH
  KO
K06966  pyrimidine/purine-5'-nucleotide nucleosidase [EC:3.2.2.10 3.2.2.-]
Organism
skh  Shewanella khirikhana
Pathway
skh00230  Purine metabolism
skh00240  Pyrimidine metabolism
skh01100  Metabolic pathways
skh01232  Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:skh00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    STH12_02198 (ygdH)
   00240 Pyrimidine metabolism
    STH12_02198 (ygdH)
Enzymes [BR:skh01000]
 3. Hydrolases
  3.2  Glycosylases
   3.2.2  Hydrolysing N-glycosyl compounds
    3.2.2.10  pyrimidine-5'-nucleotide nucleosidase
     STH12_02198 (ygdH)
SSDB
Motif
Pfam: PpnN_C DUF4478 Lysine_decarbox LDcluster4
Other DBs
NCBI-ProteinID: AZQ11284
UniProt: A0ABM7DNW8
LinkDB
Position
2519131..2520486
AA seq 451 aa
MIVKVSPRGSMDQLSQLEVDRLKQSAKSPLYQLYRNCSLAVLASGLKSDSSTELFDAYKD
FEINILQRERGVKLELVNPPEQAFVDGQIIAGIQEHLFSVLRDILYIADKYDNLKHINLT
NASHITNMVFDILRNARALPTKNDPNVVVCWGGHSINAIEYQYTREVGYQLGLRKLDICT
GCGPGAMEGPMKGAAIGHAKQRICNARYIGLTEPSIIAAEPPNQIVNELVILPDIEKRLE
AFVRLGHGIVIFPGGAGTAEELLYLLGILLNKANKDIPFPLVLTGPKESADYFIKIDEFI
GATLGEEARSKYRIIVDNPEEVARVMKESMEEVKVFRKSNGDAYPYQWSLKIEPEFQLPF
VPTHEVMANLNLYFQNNKAELAANLRRAFSGIVAGNVKGETIRLIKRHGPFEIKGDPKLM
DLMDELLQAFVVQQRMKLPGSAYEPCYKIVK
NT seq 1356 nt   +upstreamnt  +downstreamnt
atgatagtgaaagtgagcccccgtggcagcatggaccaactgtcccaactggaagttgat
cgcctcaagcaaagcgccaaaagtcccctctatcaactctaccgcaactgctccctggcc
gtgttggcctcggggctgaaaagcgacagctcaaccgagttgtttgatgcctataaagat
ttcgaaatcaatatcctgcaacgtgaacgcggggtaaaactcgaactggtcaatcccccc
gagcaagcctttgtggatggccaaataatcgccggtattcaggagcacctgttttcggtg
ctaagagacatcctctatatcgccgacaagtacgataacctcaaacacattaacctcacc
aacgccagccacatcaccaatatggtgtttgatatcctgcggaacgcccgtgccctgccc
accaaaaacgaccccaatgtggtggtctgttggggtggtcacagcatcaatgccatcgag
tatcagtacacccgtgaagtgggctatcagctggggctgaggaaactggatatctgcacc
ggctgcggccccggcgccatggaagggcccatgaaaggtgccgctatcggccatgccaaa
cagcggatttgtaacgcccgctacatcggcctgacagagcccagcatcattgccgccgag
ccgcccaatcagattgtgaacgaactggtgatcctgccggatattgagaaacgcctggaa
gccttcgtgcgcctggggcacggcattgtgattttccccggcggcgccggtacggccgaa
gaactgctctacctgctcggcatcttgctcaataaagccaataaagacatccccttcccg
ctggtactgaccggcccgaaagagagcgccgactacttcattaaaatcgatgagtttatt
ggcgccaccctcggtgaagaggcccgcagcaagtaccgcatcatagtggataaccccgaa
gaagtggcccgggtcatgaaggaaagcatggaagaggtgaaggtgttccgtaaatccaac
ggcgatgcctacccctaccagtggtcgctgaaaatcgagcctgaattccagctgcccttt
gtccccacccacgaggtgatggcaaacctgaacctttacttccagaacaacaaggccgag
cttgccgccaatctgcgacgggcgttttccggcattgtggcaggtaacgtaaaaggcgaa
actattcgcctgattaagcgccatggcccatttgagattaagggcgatcccaagctgatg
gacctgatggacgagctgctgcaggcctttgtggtgcaacagcggatgaagctccccggc
agcgcctatgagccttgctacaagatagtgaaatga

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