Shewanella khirikhana: STH12_02208
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Entry
STH12_02208 CDS
T06711
Symbol
gcvA_1
Name
(GenBank) Glycine cleavage system transcriptional activator
KO
K03566
LysR family transcriptional regulator, glycine cleavage system transcriptional activator
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_02208 (gcvA_1)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
LysR family
STH12_02208 (gcvA_1)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
Par3_HAL_N_term
HTH_30
HTH_5
Motif
Other DBs
NCBI-ProteinID:
AZQ11294
UniProt:
A0A3Q9E864
LinkDB
All DBs
Position
complement(2529583..2530494)
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AA seq
303 aa
AA seq
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MSRRLPPLNAVKAFEAAARHLSFTRAAEELFVTQAAVSHQIKALEDFLGLKLFRRKNRSL
LLTEEGQSYFLDIKDIFIQLADATDRLLARSAIGSLTVSMSPSFAIQWLVPRLAKFSEKN
PEIDVRIKAVDSEEGSLTDDVDVAIYYGQGNWAGLRADKLRNEVLIPVCSPMLLSGPKPL
EKPSDLKHHTLLHDMSRHDWQAWFRQCGVTDVNVNQGPIFSHSSLVLQAAAHGQGVALGY
SVLARPDIKAGRLVVPFQEVLVSKDAYYLVCQQNHAELGKIVAFREWMLDMFAEESRSEL
LPG
NT seq
912 nt
NT seq
+upstream
nt +downstream
nt
atgtcaagacgacttcctcccctcaatgcggtgaaggcatttgaggcggcagcacggcat
cttagttttacccgggccgcagaagagctgtttgtaactcaggcggcggtcagccatcaa
atcaaggcgctggaagactttctgggattaaaattatttcgccgaaaaaaccgctctctg
ctgttgaccgaagaaggtcagagctattttctcgacattaaagacatctttatccagctg
gccgatgccaccgaccgtctgcttgcccgcagcgccatcggttcgcttaccgtgagcatg
tcgccaagctttgcgattcagtggctggtgccaaggcttgccaagttcagtgaaaagaac
ccagaaatcgatgtgcgtatcaaggcggtggacagcgaagaaggctcgcttaccgacgat
gttgacgtggcgatttattatggtcagggcaactgggcggggctccgggccgacaagctg
cgcaatgaagtgctgattcccgtgtgttcccccatgctgctgagcggccccaaaccgctt
gaaaagccgtcagatcttaagcatcacaccctgctgcacgatatgagtcgccatgactgg
caggcctggttccgtcagtgcggcgtaaccgatgtgaacgtgaatcaggggccgattttc
agccactcgtctttggtgctgcaggcagcggcccatggtcagggcgtggcacttggctac
agcgtgctggcccgtcctgatatcaaggctggccgcctggtggtgccgtttcaggaagtg
ctggtgagtaaagatgcctactatctggtgtgccagcaaaatcacgctgagcttggcaag
attgtggcgtttcgcgagtggatgctggacatgtttgccgaagagtcccgcagcgagctg
ctgcccggctga
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