Shewanella khirikhana: STH12_02232
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Entry
STH12_02232 CDS
T06711
Symbol
glgX
Name
(GenBank) Glycogen debranching enzyme
KO
K01214
isoamylase [EC:
3.2.1.68
]
Organism
skh
Shewanella khirikhana
Pathway
skh00500
Starch and sucrose metabolism
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
STH12_02232 (glgX)
Enzymes [BR:
skh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.68 isoamylase
STH12_02232 (glgX)
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Gene cluster
GFIT
Motif
Pfam:
Alpha-amylase
CBM_48
Motif
Other DBs
NCBI-ProteinID:
AZQ11318
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Position
complement(2561867..2564173)
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AA seq
768 aa
AA seq
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MNFHAGQPGVWLTDEGASFCVFSGDSQAVFLCLIDEADKEFCYPMTRRGDLWSLTVEGVR
HGQCYGYRVHGEQDAFGSLKDPSRLLLDPYARAIVGMPAKSQREEAVLKSRLLDTAALPP
FVHPKPEQRLEHSVLYELHVKGFSMGFPGIRDEHRGKFLAFTEPKVLDYLANLGITAVEL
MPCQQFFHEPFLTDKGLTNYWGYNSIGFFAPHSDYGDISDFRAMVDALHGRGIEVILDVV
YNHTAEGGAEGPVYSFKALDNAAYYRLTEGGGYINDTGCGNTLNLNHPRVLELVMDSLRY
WSEVGGVDGFRFDLAACLGRTSTGFDVMSGFFAAIGQDPQLKRLKLIAEPWDVGPGGYRL
GEFPMAFSEWNDRYRDAIRRLWRGDETMLGEFARRFHGSADLFEASLRGPWASLNFITSH
DGFTLRDLLSYTERHNEANLEDNRDGHRENLSQNQGVEGDAPELEPLRQHKARAMLMTLL
CSFGVPMLRAGDELWQTQKGNNNAYCQDNPLAWIDWENADQDFAEFVRELIAIRRRLPLL
GAERYIHSTSVEDGRKGRFLAWFNERGEPMQDADWQGAAKRELKAGITRASGPRHEQTPL
AQAIGDAVGAEPNFYDLSPDVCRASSGALECFSTQKVAPEEELAIVAEAIQGTTALIAAF
GEHHPLRGEQLLLFVINPGSDDRILRLPSFSLWSQLTVLCSNAADSASSPDNNLDSSSLI
QGRMVQSGSCVYLPAFGAALLQSVSTAAGGAQFPESQQQAADDEGSNP
NT seq
2307 nt
NT seq
+upstream
nt +downstream
nt
atgaacttccacgccggacagcctggagtatggctaaccgacgaaggcgccagtttttgc
gtgttcagcggagacagtcaggcggtatttttgtgcctgattgacgaggctgataaagag
ttttgttatccaatgacccgtcggggtgacctctggtctttgaccgtggaaggggtgcgc
catggccagtgttatggctaccgggtccacggcgagcaggacgcctttggttcgctgaaa
gacccatcaaggctgctgcttgacccctatgcccgcgccatagttggcatgccggcaaag
tcacagcgcgaggaagctgttctcaaaagtcgtctgctggatactgccgcgctgccgccc
tttgtgcaccccaagcccgagcagcggctggagcacagcgtgctttacgagctgcatgta
aagggcttttccatggggtttcccggtattcgcgatgagcatcgcggcaagtttctcgcc
tttactgagcctaaggtgctcgattatctcgccaaccttggcattaccgcggttgagttg
atgccctgccagcagttttttcacgagccctttttaaccgataaggggctcaccaactac
tggggttacaacagcatcggctttttcgcgccccacagtgactacggtgatattagcgac
tttcgcgccatggtcgacgcccttcacggccgcggcatcgaggtgattttggatgtggtc
tacaaccacaccgccgaaggtggcgccgagggaccggtttacagcttcaaggccctcgat
aatgccgcctattaccggctcaccgagggcggcggttatatcaacgacaccggctgcggc
aacacattgaatctcaatcatccgcgggtgcttgagttggtgatggattcgctgcgctac
tggagtgaggtgggcggggttgatggattcagattcgacctggccgcttgtcttggccgc
acgtcgaccggctttgatgtgatgagtggctttttcgccgccatcggccaggaccctcag
cttaagcgtctcaagcttatcgccgagccctgggatgtgggaccgggggggtatcgctta
ggcgaatttccgatggcgttttcggagtggaatgacagataccgcgatgccatccgccgc
ctgtggcgcggcgatgaaaccatgttgggggagtttgcccgccgctttcacggctcggcg
gatctgtttgaagcaagcctgcgaggcccctgggcgagccttaacttcatcaccagtcac
gacggttttacgcttcgggatttgctctcctacaccgagcgccacaacgaggcgaacctt
gaagataaccgcgacggccaccgggaaaacctgagccagaatcagggcgttgagggcgat
gcccccgagcttgagccactgcgccagcacaaagcccgcgccatgctgatgacgctgctc
tgctccttcggggtgcctatgctgcgcgccggtgatgagctgtggcaaacccaaaagggc
aataacaatgcctactgccaggacaatccgctggcctggattgactgggaaaacgccgac
caggattttgcagaatttgtacgtgagcttattgccattcgccgccgcctgccgctcctc
ggcgctgagcgttatatccacagcaccagcgtcgaagatggccgcaaggggcgttttctg
gcttggtttaacgagcgcggcgagccgatgcaggacgccgattggcagggcgcggcaaag
cgtgagcttaaagcgggcataacaagggcttctgggccgcgccatgagcaaacgccgctg
gcgcaggccataggtgatgccgtcggggccgagccgaacttttacgacctaagcccggat
gtctgcagggcaagttcaggcgcgctcgagtgcttttcaacacagaaagtggccccagaa
gaggagctggcaattgtagccgaggccatccagggcaccacagcgctgatagccgccttt
ggcgagcatcatccccttcgcggcgagcagttgctgctgtttgtgataaatcccggcagt
gacgatcgcatcctgcgtttgccctcattcagcctctggtcgcagcttaccgtcctttgc
agcaatgccgctgactctgcgagcagtcccgataacaaccttgatagcagcagccttatc
cagggccgcatggtgcaaagcggcagctgtgtgtatctgccggcctttggcgcggcgctg
ctgcaaagtgtctcgacggcggcgggcggggcgcaatttcccgagtcacagcagcaagct
gccgatgatgaaggttccaacccttaa
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