Shewanella khirikhana: STH12_02233
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Entry
STH12_02233 CDS
T06711
Symbol
glgB
Name
(GenBank) 1,4-alpha-glucan branching enzyme GlgB
KO
K00700
1,4-alpha-glucan branching enzyme [EC:
2.4.1.18
]
Organism
skh
Shewanella khirikhana
Pathway
skh00500
Starch and sucrose metabolism
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
Module
skh_M00854
Glycogen biosynthesis, glucose-1P => glycogen/starch
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00500 Starch and sucrose metabolism
STH12_02233 (glgB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
skh04147
]
STH12_02233 (glgB)
Enzymes [BR:
skh01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.18 1,4-alpha-glucan branching enzyme
STH12_02233 (glgB)
Exosome [BR:
skh04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
STH12_02233 (glgB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GlgB_N
CBM_48
Alpha-amylase_C
Alpha-amylase
AMPK1_CBM
Motif
Other DBs
NCBI-ProteinID:
AZQ11319
LinkDB
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Position
complement(2564170..2566806)
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AA seq
878 aa
AA seq
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MTAPDVCESDVNSTLVSASASGQNSEQAHADAYSQVQSSALAHSGLISEQEARLLARGEY
VDVFSLLGMHKVAGKLCVRCFLPGAMAVDVLTKDGKKVATLDAVAREGLFAGLLGRRSNP
FTYRLRVAYPAFEVVIDDPYGFGSQLDDTSLYLFGEGRELYAQDYLGANQRVVDGVAGIL
FCVWAPNAKRVSVIGDFNHWDGRVHVMRQHPASGIWEIFIPAVHDLAHYKFEILTPAGEL
LIKSDPFAKAMEAAPNNASRVAPASAFVWQDDAWMSGRSRDWHKEAVSIYELHPGSWRRK
QDGSEQPQGTWLSYRELADELVPYIKSMGFTHIELMPLSEFPFDGSWGYQPVGLFAPTQR
FGSADDLKYLVDACHRAGIGVLLDWVIAHFPSDAHGLARFDGSCLYEHEDPRLGRHPDWD
TLIYNYGRVEVQSFLLSAATVWLRDFHIDGLRLDAVSSMLYLDYSREAGQWLPNSEGGRE
NLDAIDFLKLLNQRLYAEFPGIIMIAEESTAWDGVTRPVHQGGLGFGFKWNMGWMNDSLS
YLAKDPVYRSFHHHQLTFGIMYGHSEQFILSLSHDEVVHGKGALLSKIPGDDWQKFATLR
AYYGYMWGFPGKKLLFMGGEFGQRDEWSHDRSLDWHLLQYAPHQGLALWLADLNRLYRER
SVLGQSDHDMSAFHWLDCDNAAHGIYAFVRGWGEEALVFVVNMTPELYHGYRLGLPDVIE
ADAGEHDAKQGCVAGQACVAGLDRAAAVEWCELLNSDAHCYGGSNQGNGGVIVCDDVPAQ
GQRRSALITVPPLGCLVIARAASKRTESGQTLAVVESSLATASKTAATKTAAAKTNAVKA
KTEKAKTEKAKTEKTKTTKAKTATARPVAGTGLKGARK
NT seq
2637 nt
NT seq
+upstream
nt +downstream
nt
atgacagccccggatgtttgcgaaagcgatgtgaatagcaccctggtcagcgcttcggcg
tcgggccagaactccgagcaggcgcatgccgatgcgtattcacaagtccaaagctcagcc
ttggctcattcagggcttatcagtgagcaggaggcccgcctgttggcccgtggcgaatac
gtcgatgtgttttccctgctgggcatgcacaaggttgccggcaagctctgtgtgcgctgc
tttttaccgggtgccatggcggtggatgtgctgaccaaagacggtaaaaaggtggcaact
cttgatgcggtggcgcgggaagggctgtttgccggcctgcttgggcggcgcagcaacccc
tttacctaccggctgagggtggcctatcccgcctttgaggtggtgattgatgacccctac
ggctttggctcgcagcttgacgacacttcgctctaccttttcggtgaggggcgtgagctg
tatgcccaggattatctgggggccaaccagcgtgtggtcgatggcgtggcgggtattttg
ttttgcgtttgggcgcccaatgccaaacgggtttctgtgattggcgatttcaaccactgg
gacggccgggtgcatgtgatgcgccagcaccccgccagcggcatctgggagatttttatc
ccggcagtgcatgatttggcccactacaagtttgaaatcctcacgcctgcaggggagctt
cttatcaaatccgacccctttgccaaagcgatggaagcggcgcccaacaatgcatccaga
gtggcgccagcctcagcatttgtgtggcaggatgatgcctggatgagcgggcgcagccgc
gactggcacaaagaagccgtgagtatttacgagctgcatcccggctcctggcggcgaaag
caggacggcagtgagcagccacaaggcacctggctcagttaccgcgagcttgccgatgag
ctggtgccttacatcaagtccatgggctttacccatattgagctgatgccgctgtcggaa
tttccctttgatggttcatggggttaccagccggtaggcctctttgcccccacccagcgc
tttggcagtgccgatgaccttaaatatctggtggatgcctgccaccgcgccggcattggc
gtgctgctggattgggtgatagcccatttcccatccgatgcccatggcctggcgcgcttc
gacggcagttgcctttatgagcatgaagatccgcgccttggacgtcatcccgactgggac
accctcatctacaactatggccgcgtcgaggtgcaaagctttttactgtcggcagccacc
gtgtggcttagggactttcacatcgatgggctcaggctcgatgctgtgtcgtcgatgctg
tatctggattacagccgcgaggcggggcagtggctgccaaacagcgaaggtggtcgcgaa
aaccttgatgccatcgactttttaaagcttctgaatcaacggctttatgccgagttcccc
ggcataatcatgattgccgaagagtccaccgcctgggacggtgttacccggcccgtgcat
cagggcgggcttggctttggttttaaatggaacatgggctggatgaacgacagcttaagt
tatcttgccaaagaccccgtctatcgcagttttcatcatcatcagcttacgttcggcatc
atgtacggccacagcgagcagtttattttgtccctcagtcacgacgaagtggtgcacggc
aaaggcgcgctgctgtcgaaaattcccggtgacgactggcagaagttcgcaacgcttcgc
gcctactacggctacatgtggggcttccccggcaaaaagctgttgtttatgggcggcgag
tttggtcagcgtgatgaatggagtcacgacagaagcctcgactggcaccttttgcaatat
gcgccccatcaggggctggcgctgtggcttgccgatttgaaccgcttgtaccgcgagcgc
agtgtccttggacagagcgatcacgatatgtcagcctttcattggcttgactgcgacaac
gccgcccacggcatttacgcctttgtgcgcggctggggcgaagaggccctggtgtttgtg
gtcaatatgacccctgagctgtatcacggctaccgacttggactgccggatgttatcgag
gctgacgctggggaacacgatgctaagcagggttgtgttgcggggcaggcctgtgttgcg
gggctggacagagctgccgccgttgagtggtgcgagcttttaaacagtgatgcccactgt
tatggcggcagcaatcagggcaatggcggggtaattgtctgtgacgacgtgcctgcccag
gggcagcgaagaagcgcccttatcacagtgccgccccttggctgcctggtgattgcccgt
gctgcttccaaacgcactgaatccgggcaaacgctcgctgtggttgagtcttcgctcgcc
actgccagtaaaaccgctgccactaaaaccgcagccgctaaaaccaacgcggttaaagct
aaaaccgagaaagctaaaaccgagaaagctaaaaccgagaaaaccaaaaccacgaaagcc
aaaaccgcgacagccaggccagtcgcaggtaccgggttgaaaggggcgcgaaaatga
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