Shewanella khirikhana: STH12_02247
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Entry
STH12_02247 CDS
T06711
Symbol
oprF_5
Name
(GenBank) Outer membrane porin F precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_02247 (oprF_5)
Transporters [BR:
skh02000
]
Other transporters
Pores ion channels [TC:
1
]
STH12_02247 (oprF_5)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
TSP_3
Motif
Other DBs
NCBI-ProteinID:
AZQ11333
UniProt:
A0ABM7DBL2
LinkDB
All DBs
Position
complement(2580242..2580808)
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AA seq
188 aa
AA seq
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MDPWLKGCLLLLCLYGPCVQANSDKDGDGVPDFKDACPGTPAGSKVGANGCAVQPSFSSP
LCLMTSDNQPFPADCNHAEIPSVYFEFGSAFVPFEDAAMLARLADSVREQKVSLLLKGHT
DIIGKDDVNRRLSLARAENVAAVLSGDFGIERARIRLESCGDSEPVASNETEYGRQQNRR
VDILIIVE
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atggatccgtggctaaaaggctgtttactgctgctgtgtctttacggaccctgcgtgcag
gcaaacagtgataaagatggagatggggtaccggacttcaaggacgcatgtcccggcact
cccgcaggcagcaaagttggcgccaacgggtgcgcagttcaaccttctttttcttctcct
ctgtgcttgatgacctcggacaatcagccgtttccggccgattgtaaccatgctgaaatt
ccatcggtttattttgaattcggatcggcttttgtgccctttgaagatgccgccatgctg
gcgcggttggcagattcagtgagggagcaaaaggtgtcactgctgcttaaggggcacacc
gatattatcggcaaggatgacgtcaaccgacgcttgtcccttgcacgagccgaaaatgtg
gcggctgtgctgagtggtgactttggcattgaaagggcgcggatccgtctcgaatcctgt
ggggattccgagccggtcgcctccaacgaaaccgagtacggcagacaacaaaaccgccgc
gtggatatactgataattgttgaataa
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