Shewanella khirikhana: STH12_02272
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Entry
STH12_02272 CDS
T06711
Symbol
mutY
Name
(GenBank) A/G-specific adenine glycosylase
KO
K03575
A/G-specific adenine glycosylase [EC:
3.2.2.31
]
Organism
skh
Shewanella khirikhana
Pathway
skh03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
STH12_02272 (mutY)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
skh03400
]
STH12_02272 (mutY)
Enzymes [BR:
skh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.31 adenine glycosylase
STH12_02272 (mutY)
DNA repair and recombination proteins [BR:
skh03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
STH12_02272 (mutY)
Prokaryotic type
STH12_02272 (mutY)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
NUDIX_4
HHH
EndIII_4Fe-2S
DUF6308
Motif
Other DBs
NCBI-ProteinID:
AZQ11358
UniProt:
A0ABN5TVT0
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All DBs
Position
2601260..2602366
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AA seq
368 aa
AA seq
DB search
MAATHPSASFGERIINWYDKHGRKSLPWQQNKTPYKVWVSEIMLQQTQVATVIPYFERFM
ASFPTVSDLANAHEDEVLHHWTGLGYYARARNLHKAAQIIRDEHGGEFPTDFDAVLALPG
IGRSTAGAVLSLSLGQHHPILDGNVKRVLARHGAIEGWPGEKRVDTALWQLTEALTPKED
IQKYNQAMMDMGANVCTRSSPRCGDCPVAIDCRAQLAGRQTEFPGKKPKKTIPAREGWML
ILQQQDTVKLIKRPPSGIWGGLWCFPQFDSQQALNDFVQANGFDSDKLALLDGFRHTFSH
FHLDIQPVKLRLGSPQAEALIMEDNLSLWYNLLQGENLGLAAATERILASLVSELKQESG
GNAAANKE
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggcagcaactcaccccagcgcctcctttggcgagcgcattatcaactggtacgacaaa
cacggccgcaagagtctgccgtggcagcaaaataagacgccttataaagtgtgggtgtcg
gaaatcatgctgcagcaaacccaggtggccactgttatcccctactttgagcgctttatg
gcgagcttccccacggtaagcgacctagcaaacgcccacgaagatgaagtgctgcaccac
tggaccggccttggctactacgcccgcgcccgtaatctgcataaggctgcacaaattatc
cgcgatgagcacggcggcgagtttcccaccgattttgacgcagtgctggccctgcccggc
attggccgctccaccgcaggtgcagtgctgtcgctctctttggggcaacatcaccccatt
ctcgatggcaatgtaaaaagagtgctggcgcgccacggcgccatcgaaggctggcccggt
gagaagcgtgttgataccgccctgtggcagctcaccgaagcgctgacgccaaaggaagat
attcaaaagtacaatcaggcgatgatggatatgggcgccaatgtctgcacccgcagcagc
ccaagatgcggcgattgcccggtcgccattgactgccgggcccagcttgccggtcgccag
actgagttccccggcaaaaagccgaaaaagaccattcccgcccgcgaaggctggatgctt
attctgcagcagcaagacacggtcaagcttatcaagcggccacccagcggaatttggggt
ggcctctggtgcttcccgcagtttgacagccagcaggcgctcaatgattttgtccaggcc
aatggctttgatagcgataagcttgccctgctcgatggctttcgccacaccttcagccac
tttcacctcgacattcagccggtaaagctgcgccttggcagcccccaggctgaggcgctt
atcatggaagataacctgagtctctggtataacctcctccaaggcgaaaatcttgggctt
gccgccgccaccgagcgcattctggcgagccttgtaagcgaacttaagcaagaatccggc
ggcaacgctgccgccaacaaggagtaa
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