Shewanella khirikhana: STH12_02390
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Entry
STH12_02390 CDS
T06711
Symbol
rlmH
Name
(GenBank) Ribosomal RNA large subunit methyltransferase H
KO
K00783
23S rRNA (pseudouridine1915-N3)-methyltransferase [EC:
2.1.1.177
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_02390 (rlmH)
Enzymes [BR:
skh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.177 23S rRNA (pseudouridine1915-N3)-methyltransferase
STH12_02390 (rlmH)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STH12_02390 (rlmH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SPOUT_MTase
Motif
Other DBs
NCBI-ProteinID:
AZQ11469
LinkDB
All DBs
Position
2723958..2724428
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AA seq
156 aa
AA seq
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MKLQLVAVGTKMPDWVTRGFEEYQRRFPRDMALELVEIPAGKRGKNADIARILQKEGEQM
LAAIPKGNHIVTLDLPGKNWTTPELASALSKWQLDGRDVSLLIGGPEGLAPACKQAAAQS
WCLSALTLPHPLVRVVVAESLYRAWSINNNHPYHRE
NT seq
471 nt
NT seq
+upstream
nt +downstream
nt
atgaaattacaactcgttgccgtgggcaccaagatgcccgactgggtcacccggggattt
gaagaatatcagcgccgcttcccgcgggatatggcgctggaactggtagagatccccgcc
ggcaagcgcggtaaaaatgccgatatcgcccgtatcctgcaaaaggaaggcgagcagatg
ctggcagccattcccaagggtaatcatattgttacccttgatcttcccggcaaaaactgg
accacgcccgagcttgcatcggccctgtcaaaatggcaacttgatggccgcgatgtcagc
ctgctgataggcggccccgaaggcctggccccggcttgcaaacaagccgcagcccaaagc
tggtgcctctcagccctgaccctgccccatccgctggtgcgggtggtggtggccgagagc
ctctatcgcgcctggagtatcaacaacaatcatccgtaccacagggaataa
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