Shewanella khirikhana: STH12_02407
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Entry
STH12_02407 CDS
T06711
Name
(GenBank) Transposase
KO
K14059
integrase
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09190 Not Included in Pathway or Brite
09192 Unclassified: genetic information processing
99976 Replication and repair
STH12_02407
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GFIT
Motif
Pfam:
Phage_integrase
Arm-DNA-bind_2
Phage_int_SAM_3
Phage_int_M
Motif
Other DBs
NCBI-ProteinID:
AZQ11485
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Position
complement(2742095..2743279)
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AA seq
394 aa
AA seq
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MGTVNSRDGKLYLDFRYMGVRCREQTSLVDNPTNRQKLSKLMALLEQQMKSGCFDYGHHF
PSSPKAEHFQLLAKLSQLKAVGGRMQLAAFANLWLAEKKVEWRPSQVETVEGILRCHLIP
ALGNSMIVAITKTDILGFRTRLCEVDAATSKSLSASRINHIMTYLRLILSDAAERFGFEN
PWRNIKALPMPRSDIQPFSLDEVCRIIEAVRSDFRSYYIVRFFTGMRTGEIDGLTWENVD
FANQLIHIRQSLVRGTLGPTKTQGSCRAIAMSQPVYEALLVQRQQTGTMSKFVFCNKRAE
ALNHQNVTKRIWYPLLADLKLEKRNPYQTRHTAATLWLAAGESPEWIARQLGHANTSMLF
RVYSRYVPNLLGQDGAAFESLIRKGQGPKGGDSK
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atgggaacagtgaatagccgtgatggcaaactatacctggattttcgctacatgggcgtg
cgctgcagagagcaaaccagccttgtcgataatcctactaacaggcagaaactcagcaaa
ttgatggctctgcttgaacaacaaatgaaaagcggctgttttgattatgggcaccatttt
cctagtagccccaaggcagagcatttccagctgctcgctaaactcagccagcttaaggct
gtcggtgggcgaatgcagcttgccgcatttgccaacctttggttagcggaaaagaaagtg
gagtggaggcccagtcaggttgagacggttgaagggattctcaggtgccatctgatccct
gcgttaggtaatagcatgattgtcgcgatcactaagacagatattcttggatttcgcaca
cggttatgcgaagtcgatgctgctacttcgaaatcattatcggcctcgcgcattaatcac
atcatgacatatctacgcctaattctgagtgatgccgctgagcgttttggttttgaaaac
ccttggcggaatatcaaggctttgccaatgcctcgaagtgacattcaaccattttcgctt
gatgaggtctgccgcattatagaggcggtaagaagcgattttcgctcctactatatcgtt
cgattttttactggcatgcgaaccggtgaaatcgatggcttgacgtgggaaaacgttgat
ttcgctaaccagttaattcacatccgtcagtcattggttcgggggactcttggtcccaca
aaaacacagggttcatgcagggcaattgcaatgagtcagccagtatatgaagcgctgctg
gttcagcggcagcaaactgggaccatgagcaaatttgtcttttgcaataagcgtgctgaa
gcattgaatcatcaaaatgtcaccaaacgcatctggtacccactattggcagacctgaag
ctcgaaaagcgtaatccttaccagacacggcataccgcggcgaccctctggctggctgcc
ggcgagagtccagaatggattgccagacaattaggacacgcaaataccagcatgcttttc
agagtctactcacggtatgtgcccaatttacttggacaagatggtgcagcgtttgaaagt
ttaatccgcaagggacaggggccgaaagggggggattcaaaatga
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