Shewanella khirikhana: STH12_02527
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Entry
STH12_02527 CDS
T06711
Symbol
davT
Name
(GenBank) 5-aminovalerate aminotransferase DavT
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
skh
Shewanella khirikhana
Pathway
skh00250
Alanine, aspartate and glutamate metabolism
skh00280
Valine, leucine and isoleucine degradation
skh00310
Lysine degradation
skh00410
beta-Alanine metabolism
skh00640
Propanoate metabolism
skh00650
Butanoate metabolism
skh01100
Metabolic pathways
skh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
STH12_02527 (davT)
00650 Butanoate metabolism
STH12_02527 (davT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
STH12_02527 (davT)
00280 Valine, leucine and isoleucine degradation
STH12_02527 (davT)
00310 Lysine degradation
STH12_02527 (davT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
STH12_02527 (davT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
skh01007
]
STH12_02527 (davT)
Enzymes [BR:
skh01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
STH12_02527 (davT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
STH12_02527 (davT)
2.6.1.48 5-aminovalerate transaminase
STH12_02527 (davT)
Amino acid related enzymes [BR:
skh01007
]
Aminotransferase (transaminase)
Class III
STH12_02527 (davT)
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Paralog
GFIT
Motif
Pfam:
Aminotran_3
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
AZQ11596
UniProt:
A0ABM7DPJ6
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All DBs
Position
complement(2883223..2884500)
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AA seq
425 aa
AA seq
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MSLTNDSLMVRRRAAVAGGVGQIHPVFTERAENATVWDVEGREYIDFAGGIAVLNTGHLH
PKVKAAVAEQLDKFSHTCFMVLGYESYVSVCEKLNQLVPGDFAKKSALFTSGSEAVENAI
KVARAYTKRAGVIAFTSGYHGRTMAALALTGKVAPYSKGMGLMQANVFRAEYPCELHGVS
EDDAMASIGRIFKNDAEPSDIAAIILEPVQGEGGFYAATPSFMKRLRELCDREGIMLIAD
EVQTGAGRTGTFFAMEQMGVAADITTFAKSIAGGFPLSGITGRAEVMDAIGPGGLGGTYG
GSPLACAAALAVIEVFEEEKLLERANAIGQTIKSAIGELASRYSQIAEVRGLGSMIAIEL
MENGKPAPEYCPQVLTEARNRGLILLSCGTYGNVLRILVPITAPDEQIQRGLEIMAECFE
AVLGK
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atgagcttgaccaatgattcattgatggttcgtcgccgcgctgctgtagccggtggcgtt
ggccaaatccaccctgtgtttaccgagcgtgccgaaaacgccaccgtgtgggacgtggaa
ggtcgtgagtatatcgactttgccggcggcattgcggtgctgaacacaggccacctgcat
cccaaagtgaaggccgccgtggccgagcagctggataagttttctcacacctgttttatg
gtgctgggctatgaaagctacgtgtcagtatgtgaaaagctgaaccagctggtgcccggt
gacttcgccaagaagtcggccctgttcaccagtggctcggaagccgtggaaaacgccatt
aaggtggcccgcgcctacaccaagcgtgccggtgtgattgcctttacctccggctaccat
ggccgcaccatggcggcgctggcgctgaccggcaaagtggcgccatacagcaagggcatg
gggctgatgcaggccaacgtgtttcgcgccgaatacccctgtgaactgcacggggtgagc
gaagacgatgccatggcgtctattgggcgtatttttaagaacgacgccgagccaagcgac
attgccgctatcatcctcgagcctgtccagggcgagggcggtttctacgccgcaacccca
agctttatgaaacgtctgcgcgagctgtgtgaccgcgaaggcattatgctgattgccgac
gaagtgcaaacaggcgctggccgtaccggcaccttctttgccatggagcaaatgggcgtt
gctgcggacatcaccaccttcgccaagtcgattgccggtggcttcccgctttctggtatt
accggccgcgccgaggtgatggatgccattggccccggtggccttggcggcacctacggc
ggcagcccactggcctgcgccgcagcgcttgctgtgattgaagtctttgaagaagaaaaa
ctgctggagcgcgccaacgccattggccagaccatcaagtctgccatcggtgagctcgcc
agccgttattcgcaaatcgccgaggtgcgtggtctgggttccatgattgccattgagctg
atggaaaacggcaagcctgcccctgagtattgcccgcaggtactcaccgaggcccgtaat
cgcggccttatcctgctgtcgtgcggtacctacggtaacgtgctgcggattttggtgccc
atcacggcgccggatgagcaaattcagcgcgggctggagatcatggctgagtgtttcgag
gccgtactcggcaaataa
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