Shewanella khirikhana: STH12_02571
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Entry
STH12_02571 CDS
T06711
Symbol
cydD
Name
(GenBank) ATP-binding/permease protein CydD
KO
K16013
ATP-binding cassette, subfamily C, bacterial CydD
Organism
skh
Shewanella khirikhana
Pathway
skh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
STH12_02571 (cydD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_02571 (cydD)
Transporters [BR:
skh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
STH12_02571 (cydD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_29
AAA_22
Dynamin_N
nSTAND1
MMR_HSR1
AAA_23
RsgA_GTPase
AAA_16
MobB
T2SSE
cobW
Pox_A32
AAA
HUTI_composite_bact
Motif
Other DBs
NCBI-ProteinID:
AZQ11640
UniProt:
A0ABN5TZF1
LinkDB
All DBs
Position
complement(2932167..2934008)
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AA seq
613 aa
AA seq
DB search
MDKSLEKQLSQWLKSRKGACGPFLAFSVALGVLGGVLLIAQAFVIASILSAVVMEAAAPS
SFISEFAALAALIVARALCAWGRERLGFEAGRRLRLGLRQQVLTRLTELGPAFVKGKPLG
SWGAVVIEQIEDLHDFYARYLPQLSIAALIPLIILACVFPMNWAAGLILLGTAPLIPLFM
ILVGMGAADANRKHFSALQRLSGHFMDRLKGLVTLRLFHRADAEGKAIEKASDEFRSRTM
AVLRMAFLSSAVLEFFAAISIALVAVYFGFSYLGHLDFGHYDLGISLFTGLFVLMLAPEF
YQPLRDMGTHYHAKAQAVAAAEALSELLSLENSAHQGKQPLPQQREIVAKDLIIYSHQGA
KLAGPLSFSLNPGERLAIVGPSGSGKTSLLNALLGFLPISGEFCVGGVNIHELDMGDWRR
TIAWLGQEPHLFHGSLKDNIAMGRSLDEKALLALCDKAQIGDFVASLPKGLEHPIGEGGG
GLSVGQAQRFALARALAGEPELFLLDEPGASLDVDSEQRVMAAIHAESQGKSLLMVSHRL
DELERLDGVLVMDAGRIVERGTVAELSASGGLFASLLAESGLAESGLAAAGLAQPDSELE
EQAQEPRLGGDAS
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atggacaaatccctcgaaaaacaactttcccagtggctaaagagtcgcaaaggcgcctgc
ggtccctttttggcattcagcgtcgccctcggtgtgcttggtggcgtgctgctgatagcg
caggcttttgttatcgcaagcattctttcggccgtggttatggaagccgcagcaccatct
tcctttatcagcgagtttgccgccctggcggcattgattgtggccagggccttatgtgcc
tggggccgtgagcggctggggtttgaggccgggcgccgactgcgacttggtttacgtcag
caggtgctcacccggctgaccgaactggggcccgcctttgtcaagggcaagccccttggc
agctggggcgctgtggtgattgagcaaatcgaagatttacacgacttttacgcccgctac
ctgccgcagctgtcgattgcggcgctgatcccgctgattattcttgcctgcgtatttccg
atgaactgggcggcaggccttattctgctcggcactgcgccgcttattccactgtttatg
atcctggtgggtatgggcgccgccgatgccaatcgcaagcatttctcggcgctgcaaagg
ctctccggccactttatggaccggctaaaagggctggtaacactgcggctgtttcaccgc
gccgacgccgaaggcaaggccatcgaaaaggcctcggatgagtttcgaagccgcaccatg
gcggtgcttaggatggcgtttttaagctcggcagtgctggagttttttgccgctatcagt
attgcgctggtggcggtgtactttggtttcagttatctcggtcatctggattttggccac
tatgacctcgggataagcctgtttaccggcctgtttgtgctgatgctggcgcccgaattt
tatcagccgcttcgggacatgggcacccactatcatgccaaggcgcaggcggtggcggcg
gccgaagcgctgtctgaactgttaagccttgaaaacagcgcccatcagggcaagcagcca
ttgccgcagcagcgcgagattgtggcaaaggacctgattatctacagccatcagggcgca
aagttggctggccccttaagctttagccttaacccaggggagcggcttgccatagtcggg
ccttctggctcgggcaaaaccagtttactcaatgcgttactgggctttttgcccatcagc
ggtgagttttgtgtgggcggggtaaacatccatgaactggacatgggcgactggcgccga
accatcgcctggcttgggcaggagccgcatttgttccacggcagcttaaaggacaatatc
gccatgggccgcagccttgatgaaaaggcgctgctggcgctgtgcgacaaggcgcagatt
ggcgattttgttgcgtcattgccaaaggggcttgagcatcccatcggcgaaggcggtggc
ggtctgtcggttgggcaggcccagcgattcgcgctggcgcgggcgcttgccggtgagcct
gagctctttttgctggatgaacccggtgccagtctggatgtggacagtgagcagcgggta
atggcggcgattcatgccgaaagtcagggtaagagcctgctcatggttagccaccgactg
gatgagctggagcgcctcgatggggtgctggtgatggatgccggccgcattgttgaacgt
ggcaccgtggctgagctcagtgcatcaggggggctttttgcatccctgttggccgagtca
ggattggccgagtcagggttggccgcagcaggattagcacaaccagattcagagctcgaa
gaacaggcacaggaaccgcgactgggaggggatgcatcatga
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