Shewanella khirikhana: STH12_02612
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Entry
STH12_02612 CDS
T06711
Symbol
xerD
Name
(GenBank) Tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
skh03036
]
STH12_02612 (xerD)
Chromosome and associated proteins [BR:
skh03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
STH12_02612 (xerD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Phage_int_SAM_5
Motif
Other DBs
NCBI-ProteinID:
AZQ11681
LinkDB
All DBs
Position
complement(2977838..2978857)
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AA seq
339 aa
AA seq
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MSANAAPKSSSRNSRSGRSRGDKSRSDKPSRKTSKTTAAVKPSAQGAMLIDAFVDELWSL
HGLSDNTLSAYRTDLAQFEVFLGSRGMTLLTLDTLTLRDYLAFRVEKGMAKTSTARMLSS
LRRFYRHLLVSGQITEDPTALVESPKLAKPLPGSLSEAEVERLLAEPNSEDPIECRDKAM
LELLYATGLRVSELVGLGMSELSLRQGLVRIIGKGGKERLVPMGEVAQDALELFFDGSRQ
QLLKQGACDVVFPSSRGQQMTRQTFWHRIKLYALRASIHTELSPHTLRHAFATHLLNHGA
DLRVVQLLLGHSSLSTTQIYTHVARTRLADLHGQHHPRG
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
ttgagcgccaacgctgcccccaaatcttccagcaggaactcccgtagcggcagatcccgt
ggtgataagtcccgtagcgataagcccagtcgcaagacgtccaaaactaccgcggcggtg
aagcccagcgcccaaggcgccatgcttatcgatgcctttgtggatgagctctggtcgctg
cacgggctgtcggacaataccctcagtgcctatcgaaccgacctggcgcagtttgaggtg
tttttgggaagccggggcatgacactgctgacgttggacaccctgaccttgcgggactat
ctggcgtttcgggtcgaaaagggcatggccaaaacctccaccgcgcgcatgctctcgagt
ctgagacgcttttaccgccatttattggtgtcggggcagataacggaagatcccaccgcg
ctggtggaatcacccaagcttgctaaacctttgcccggcagcctgtccgaggccgaagtg
gaacggctgctggccgagccaaacagcgaagatccgatagagtgccgtgacaaggccatg
ctggagctgctctatgccaccgggctgcgggtcagtgagctggtggggctggggatgtcc
gagcttagcctgcgtcaggggctggtgcggattatcgggaaaggcggcaaggagcggctg
gtgcctatgggcgaggtggctcaggatgcgctggagctgtttttcgatggctcgcgtcag
caactgctcaagcagggtgcttgtgatgtggtgtttccatcgagccgtggccagcagatg
acccgccagaccttttggcatcgcatcaaactctacgccctcagggccagtattcacacc
gagctgtcgccccataccttaaggcatgcgtttgcaacccaccttttgaaccatggcgcc
gatctgcgggtggtgcagttactgctgggccacagttcattgtcgacaacccagatctac
acccatgtggccaggacccgactggcggatttgcatggtcagcaccacccaaggggctga
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