Shewanella khirikhana: STH12_02713
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Entry
STH12_02713 CDS
T06711
Symbol
fhlA
Name
(GenBank) Formate hydrogenlyase transcriptional activator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_02713 (fhlA)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
Other families
STH12_02713 (fhlA)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS_9
PAS
PAS_4
AAA_5
HTH_8
Mg_chelatase
PAS_3
AAA
PAS_8
PAS_7
AAA_2
AAA_19
AAA_16
GAF
AAA_22
AAA_30
AAA_7
HTH_30
bpMoxR
Motif
Other DBs
NCBI-ProteinID:
AZQ11782
LinkDB
All DBs
Position
3080357..3081784
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AA seq
475 aa
AA seq
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MAKQESFLPENRLLLDAVSEGIYGFDLDGNAVFINPAAERMTGWQAQELLGKTIHNFHHH
SHEDGSHYPQEDCPIYQTLKDGKAREISNEVFWRKDGSSFPVHYSSTPVWQNGKLKGVVA
IFRDISLQRQTEQSLRQALEQVQALSEQLASENSLLQAELEDKRGPSQITGSSECIQNLQ
KQIRLVANTGSTVLIQGENGTGKELVARELHQLSSRRDKPMISVNCAAFSASLLESELFG
HEKGAFTGASSRRKGRFELAHSGTLFLDEVAELSLEAQSKLLRVIQEQEFERLGGSERIK
VDIRLIAASHHDLQKRVEQGLFRMDLFYRLNVFPLRVPPLRQRTEDIPELVQQLLKGLSQ
KLGKPLAGVDSASLKRLQQYNWPGNVRELQNLLEREAILSREPILKVSSIPGSSNLPIAG
NTLAEVEASHIRATLDACHWRISGPSGAAAALGLPPSTLRSRMQKLKIHRPGLGH
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atggccaaacaggaaagctttttgccggaaaatcgtctgctgctggatgcagtcagcgaa
ggtatctatggttttgatttggatgggaatgccgtatttatcaatccggcggccgaacgc
atgaccggctggcaggcacaggaactgctcggcaaaaccatccataacttccaccaccac
agccacgaagatggcagccactatccccaggaagactgccccatctatcaaacattgaaa
gacggcaaggcccgggaaatcagcaatgaagtgttctggcgcaaggatggcagcagcttc
ccggtgcactacagctcaaccccggtgtggcagaatggcaagcttaaaggcgtagtcgcg
atatttcgtgatatcagtttacaaaggcaaaccgagcagtcgctgcgccaggcgctcgag
caggtgcaggcgctgtcagagcagctggcatcggaaaactcactgctgcaggccgagctt
gaggacaagcgcggcccctcacaaatcaccggcagcagcgagtgcattcaaaacctgcaa
aaacaaatccgtctggtagccaacaccggcagtactgtgctcattcagggcgagaacggc
acaggcaaagagctggttgcccgcgagcttcatcagctcagcagtcgccgcgacaaaccg
atgatctcggtaaactgcgccgccttctcggcgtcactgctcgaaagcgagttgttcggc
catgaaaaaggtgcctttaccggcgccagcagccgtcgcaagggtcgcttcgagctggcc
cacagtggcaccttgtttttggatgaagtggccgaacttagcctggaggcgcagtccaag
ctgctgcgggttattcaggagcaggagtttgaacgcctcggcggcagcgaacgcatcaag
gtggatatccgcctgattgccgccagtcaccatgatttgcaaaaacgggtcgaacagggg
ctgttccggatggatcttttctaccgcctgaatgtgtttccgctgcgggttccaccgcta
cgccaacgcaccgaggatattcccgagctggtgcagcagctgctcaaaggcctgtcgcaa
aagcttggcaagccccttgccggagtcgacagcgccagccttaagcggctgcaacagtac
aattggcccggcaatgtgcgtgagctgcaaaacctgctggagcgggaagcaattctgagc
cgcgaacctatcctcaaggtcagctccatcccgggcagcagtaatttgccaatagcggga
aacaccctggccgaagtggaagcaagccacattcgcgcgaccctggatgcctgtcactgg
cggatctcggggccatccggcgccgcagcagccctggggctgcccccaagcaccctgcgt
tcacggatgcaaaagcttaagatccatcgccccgggttgggtcattaa
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