Shewanella khirikhana: STH12_02777
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Entry
STH12_02777 CDS
T06711
Name
(GenBank) Putative multidrug export ATP-binding/permease protein
KO
K06147
ATP-binding cassette, subfamily B, bacterial
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_02777
Transporters [BR:
skh02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
STH12_02777
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
AAA_29
AAA_16
AAA_21
AAA_5
RsgA_GTPase
DUF378
MMR_HSR1
DUF815
ABC_ATPase
AAA_25
AAA_15
nSTAND3
Motif
Other DBs
NCBI-ProteinID:
AZQ11846
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Position
complement(3157889..3159670)
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AA seq
593 aa
AA seq
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MPDASAPVSSTVTIPSGNVVAWIGGFLRPYKLRVIIALVCLLIGSLAWLALGQGVKLIVD
EGFVAGNVDRLNQLVWVLIGIAAISSSAVFCRFYLMSWLGERVSNDIRARVYDNLLTLPP
AFYAKLRTGEVISRFTADSTLLQTVIGSSFSMALRSFVSVLGGILMMAITSLKLTALVLV
AVPAVLVPILIFGRKVRALSRDSQDRVADLGAYIDESLHEIHTVQSYTHEQVDRDKFGGL
LTKVLGSAGRRIQFRALLIAGVMFLTIAAIALMIWVGARDVMSGAISAGELSAFLFYALL
VAGATATISEVIGDVQRASGAAERLKELSEALSDIPAAANPMKLPNNLAGDIRIEGLSFS
YPGTDIRALDNISVHIRPGEKVALVGESGAGKSTLFQLLGRFYAPDSGAIYLDNTDIALT
DLQSLRRAFALVPQESVIFADSVLENVRYGKVDASLDEVKAACVAARAHEFIEAMPEGYH
SYLGERGVKLSGGQKQRIAIARAILASRPVLLLDEATSALDAVSERYVKEALDSLISGRT
SLIIAHRLATVINADRILVMDKGKIIAEGSHTELLETSPQYREFASLQLLNES
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
ttgccggatgcatccgctcctgtctcgtcaaccgtcactataccgtccggcaatgtcgtt
gcttggattggcggttttttacgcccctataaactcagggttatcatcgcccttgtgtgc
ctgctgattggctcgctggcctggcttgcgctggggcagggggtaaaactcattgtggat
gaaggctttgtggcagggaacgtcgacaggctcaatcagctggtttgggtgctcatcggc
atcgccgccatcagctccagtgctgtattttgccgtttttatctgatgagctggcttggc
gagcgggtgagtaatgatatccgcgcccgggtgtacgataacctgttgaccctgcctccg
gccttttacgccaagctgcgtaccggcgaagtgatttcccgctttaccgctgattccacc
ttgctgcaaaccgtgattggctccagcttctccatggcacttcgctcttttgtgtctgtt
cttggtggcattttgatgatggccattaccagccttaaactcacggcgctggtgctggtg
gccgtgcctgcagtcttggtgcctattctgatttttggtcgtaaggtgcgggcactttcc
cgcgacagccaggacagggtggccgatctcggagcctatatcgatgagagcctgcatgaa
atccacacagtgcagtcttacacccacgaacaggtggacagagacaagttcggcggcttg
cttaccaaggtgcttggcagcgctggcagacggattcagtttcgggcgctgcttatcgcc
ggagtgatgtttttaaccatagccgccatcgccctgatgatttgggtcggcgcaagggat
gtgatgagcggcgccatcagcgccggtgagctgtcggcgtttttgttttatgccctcttg
gtggcgggtgctactgcgaccatcagcgaagtgattggcgatgtgcagcgggccagcggc
gccgccgagcgtttaaaagaactgagtgaagcgctgagtgatattcctgctgccgccaac
cccatgaagcttcccaataatcttgccggcgatatccgcatcgaggggctgagtttcagc
taccccggcactgacatcagagccctggataatatttcggtgcatatccgacccggtgag
aaggtggcgctggtgggggaaagcggcgccggtaaaagcaccttgtttcaactgcttggg
cgcttttatgccccggacagcggcgcgatttaccttgataacaccgacatcgccctgacc
gatttacaatccttgcgccgtgcctttgcgctggtgccccaggagtcggtgatttttgcc
gattcagtgctggagaacgtgcgctacggcaaggtggatgcaagcctcgatgaggtcaag
gctgcctgtgtggccgcccgcgcccacgagtttatcgaggccatgcccgagggttaccac
agctatcttggcgagcgcggagtaaaactctccggcggccaaaagcagcgtatcgccatc
gcccgggcgatactcgcaagccgcccggtattactgctggatgaagccaccagtgccctc
gatgcagtcagcgagcgctatgtgaaagaagcactggatagcctcatttccggccgcacc
agccttatcatcgcccaccgcctcgccactgtaatcaacgccgaccgtattctggtgatg
gacaagggcaaaatcattgccgaaggcagccacaccgagcttttggaaaccagcccgcaa
taccgcgaatttgccagcctgcagctgcttaacgagagctga
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