Shewanella khirikhana: STH12_02820
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Entry
STH12_02820 CDS
T06711
Symbol
rsuA_3
Name
(GenBank) Ribosomal small subunit pseudouridine synthase A
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_02820 (rsuA_3)
Enzymes [BR:
skh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
STH12_02820 (rsuA_3)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
STH12_02820 (rsuA_3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AZQ11889
LinkDB
All DBs
Position
3205664..3206455
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AA seq
263 aa
AA seq
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MTLTPKSTPQAQAPTANAGKGIRLCKFLADAGVCSRRAASRLIEAGRVSLDGETANHTIR
VLPGAQVCVDGAPISHGAPRQYYLFNKPVGMDCRLLPNDPSSLLDYLQSRFPPQLHLYPA
GRLDKDSRGLLLLTNDGELTQQLMHPDYHHEKGYLVTLDKPPLAADIAAIAAGLDYGDGL
TRPCRIKHPPTQTEDNTQLRMWLTEGKKRQIRRLWQARGYRVVDLLRESIQSLTLGSLTE
GEIRPLTEAELSALKQSLAIKQP
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgactctcacgccaaaatccacaccccaagcccaggccccgaccgctaacgcgggcaaa
ggcatacgtttatgcaagtttctcgcagacgcaggcgtgtgctcccgccgggcagcctca
cggctgattgaagcaggccgggtgagccttgatggtgaaacggcaaaccacaccatcagg
gtgttacctggcgctcaggtgtgtgtggatggagcccccattagccacggcgcgccgcgc
caatactatcttttcaacaaacccgttggcatggactgccggttgctgccaaacgatccc
agcagcctgctggattatttgcagagccgatttccgccacagcttcacctctaccccgca
ggccggttggataaagactcccgcggcctcttactgctcactaacgacggcgagctgacc
cagcagctgatgcacccggattatcatcacgaaaagggctatctggtgaccctcgataaa
ccaccgctggcagcagacatcgccgccattgccgccggcctcgattacggtgatggcctc
acccgcccctgccggattaaacatccacccactcaaaccgaagacaatacacagctgcgt
atgtggctgactgagggcaaaaagcggcaaatacgccgcctgtggcaggcccggggttat
cgggtggtggatctgctcagagaatcgatacaaagcctgacccttggcagtctcaccgaa
ggcgaaatacggcccctgaccgaggctgaactcagtgcgctcaagcagtctttggccatc
aagcagccttag
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integrated database retrieval system
