Shewanella khirikhana: STH12_02837
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Entry
STH12_02837 CDS
T06711
Symbol
rpfG_5
Name
(GenBank) Cyclic di-GMP phosphodiesterase response regulator RpfG
KO
K07814
cyclic di-GMP phosphodiesterase [EC:3.1.4.-]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09190 Not Included in Pathway or Brite
09191 Unclassified: metabolism
99980 Enzymes with EC numbers
STH12_02837 (rpfG_5)
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GFIT
Motif
Pfam:
HD_5
Response_reg
HD
Motif
Other DBs
NCBI-ProteinID:
AZQ11906
UniProt:
A0ABM7DQE2
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All DBs
Position
complement(3226791..3227813)
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AA seq
340 aa
AA seq
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MIIDKATVLVVDDTPENIDILVGILGQDYKVKVAIDGPKALAVAQSSPPDLILLDVMMPG
MSGYEVCRRLKQEPMTSHIPVIFVTAMAEVADETQGFELGAVDYITKPVSAPIVKARVKN
HLALYDQKRLLEEQVRERTKELERTRFEIIRRLGRAAEYKDNETGLHVVRMSHYARLLSR
QAGLPDPFCEMLYNAAPMHDIGKIGTPDAVLKKPAKLDADEWKIMQQHAEIGAEIIGEHP
DPLLQMSRRIALTHHEKWDGSGYPRGLKGEEIPIEGRIVAIADVFDALTSIRPYKKAWTI
EDTMALLESEAGKHFDPALVEHFKTILSEVIAIRDQHIET
NT seq
1023 nt
NT seq
+upstream
nt +downstream
nt
gtgataatcgataaagccacagtgttggtagtggatgatacccctgagaatatcgacatt
ctggtggggatcctggggcaggactacaaggtgaaagtggcgattgacggccccaaggcg
ctggccgtggcgcagagttcgccgccggatctgattttgctcgatgtgatgatgcccggc
atgagtggctacgaggtttgtcgccgcttgaagcaggaacccatgacgtcccatattccg
gtgatttttgtcactgccatggccgaggtggccgatgaaacccagggttttgagctgggg
gcggtggactatatcaccaagccggtgagtgcgccgattgtgaaggcgcgggtgaaaaat
catctggcgctgtacgatcagaagcggctgctggaagagcaggtccgtgagcgcaccaaa
gaacttgaacgcacccgtttcgagattatccgtcgtctcggccgggctgccgaatacaag
gacaatgaaaccgggctgcacgtggttcgcatgagccattacgccaggttgctgtcgcgt
caggcggggttgcccgatcctttctgtgaaatgctctacaacgctgcccccatgcacgat
atcggcaaaatcggtaccccggatgcggtgctgaaaaagcccgccaagctggatgcggac
gagtggaaaatcatgcagcaacacgccgaaatcggcgccgagatcatcggtgagcacccg
gatcccttgctgcagatgtctcgccgtatcgcattgacccaccacgaaaaatgggatgga
tcaggttatccgcgcggccttaagggcgaggagatccccatcgaggggcgtatcgttgcc
attgctgatgtgtttgatgcgctgacatcgattcgcccttacaaaaaggcctggaccatt
gaggacaccatggcgctgctggagtccgaagcgggtaagcactttgacccggcgctggtc
gagcacttcaagacaatactgtccgaggtgattgccattcgcgaccaacatattgaaacc
tga
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