Shewanella khirikhana: STH12_02857
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Entry
STH12_02857 CDS
T06711
Symbol
rlmI_2
Name
(GenBank) Ribosomal RNA large subunit methyltransferase I
KO
K06969
23S rRNA (cytosine1962-C5)-methyltransferase [EC:
2.1.1.191
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_02857 (rlmI_2)
Enzymes [BR:
skh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.191 23S rRNA (cytosine1962-C5)-methyltransferase
STH12_02857 (rlmI_2)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STH12_02857 (rlmI_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltrans_SAM
PUA_3
Cons_hypoth95
MTS
PrmA
Methyltransf_25
Methyltransf_15
TRM
Methyltransf_11
TRM5-TYW2_MTfase
Methyltransf_12
PUA
Motif
Other DBs
NCBI-ProteinID:
AZQ11926
LinkDB
All DBs
Position
complement(3252693..3253883)
Genome browser
AA seq
396 aa
AA seq
DB search
MSIRIKLKPGREKSLDRRHPWVFSSGVHNIKGKPLRGETVDVVAHDGRWLGRGAWSDASQ
IQVRVWTFDKEEAIDRDFFASRIARAQAGREELIREKGLTGYRLVGAESDGLPGITIDRY
ANVLVCQLLSAGADYWRDTLVSVLAEQFPNCAIYERSDVDSRKKEGLPLVTGLLHGELPA
MPLIIEENGIKIAVDVEKGHKTGFYLDQRDNRAMAARFVAGKSVLNCFCYTGTFGLYAAK
AGAASIENVDVSTLALDTARHNMAINGLNDDHVTYSEADVFKLLRQYRDEGKTFDVIVLD
PPKFADNKAQLNGACRGYKDINMIAMQLLKPGGTLLTFSCSGLMPADLFQKIVADAALDA
GRDAQFIERLSQASDHPIGAAFPEGFYLKGLVARVW
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgagcattcgcatcaaactcaagccgggacgggaaaagtccctcgaccgtcgtcacccc
tgggtgttttccagcggcgtccacaacatcaagggcaagcccctgcgcggcgaaaccgtg
gatgtagtggcccatgatggccgctggcttggccgcggtgcctggtcagatgcctcgcaa
attcaggtgcgtgtgtggacttttgataaagaagaagccatcgaccgcgactttttcgcc
agccgtatcgcccgcgcccaggctggccgcgaggagcttatccgcgaaaagggcctcaca
ggttatcgcttggtaggcgccgagtccgacggtttgcccggcattaccatcgaccgctac
gccaatgtgcttgtgtgccagctgctgtcggccggtgccgattactggcgcgataccctg
gtgtctgtgctggccgagcagttccctaattgcgccatctatgagcgctccgatgtggac
tcccgcaagaaagaaggcctgccgctggtaacaggtttgctccacggcgagctgccagcc
atgccactgattattgaagaaaacggcatcaagattgccgtcgatgtagaaaagggtcac
aagactggcttttacctcgaccagcgcgacaaccgcgccatggcagcccgcttcgtggca
ggtaagtcggtgctcaactgcttctgctacacaggcacctttggtctttatgccgccaag
gccggtgccgccagcatagaaaacgtggacgtatccacgttggcgctggacacagcccgt
cacaacatggccatcaatggcctgaacgatgaccatgtgacctacagcgaggcagatgta
ttcaagttgttgcgccagtaccgcgacgaaggcaaaaccttcgatgtgatagtgctcgac
ccgcccaagtttgccgacaacaaggcccagctcaatggtgcctgtcgtggctacaaggac
atcaacatgattgccatgcagctgcttaagcccggtggcaccctgctgaccttctcctgc
tccggcctgatgcctgcagatctgtttcagaaaatcgtcgccgatgccgccctggatgcc
ggccgcgatgctcagtttatcgagcgcctgagccaggcctcggaccacccgatcggtgcc
gccttcccggaaggcttctacctcaagggattggttgcccgagtttggtaa
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