Shewanella khirikhana: STH12_02907
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Entry
STH12_02907 CDS
T06711
Symbol
yheS
Name
(GenBank) putative ABC transporter ATP-binding protein YheS
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
skh03012
]
STH12_02907 (yheS)
Translation factors [BR:
skh03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
STH12_02907 (yheS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
MMR_HSR1
KAP_NTPase
RsgA_GTPase
AAA_22
AAA_16
ATP-synt_ab
MeaB
DUF815
ABC_tran_CTD
DUF7623
AAA_23
DUF87
Thymidylate_kin
Motif
Other DBs
NCBI-ProteinID:
AZQ11976
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All DBs
Position
3305408..3307315
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AA seq
635 aa
AA seq
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MITLSQAQLIRGSKVLLDEANLTIYPGHKVGLVGANGTGKSSLLALIMDKLTLDKGELQV
PREWRIASVAQETPALDVSALEYVLDGDTEFRELEADLRQAEADNDGHAIALLHGKLDAI
GGYSIRARAGALLAGLGFSEDKQSSPVKSFSGGWRMRLNLAQALLCRSDLLLLDEPTNHL
DLDTMFWLEDWIKAYPGTLVLISHDRDFIDAIVDEIVHVEQQKLNYYKGNYSTFERTRAE
RMAQQQVAFERQQRERAHMQSFVDRFRYKASKAKQAQSRLKALEKMTELLPAKADSQFHM
AFREPASLPNPLVAMENVSVGYGDTPILGKVHLNLVPGARIGLLGRNGAGKSTLIKLLAS
ELKPMTGRYEPNPGLNIGYFAQHQLEYLHLDDSPLMHLQRLAPTHREQELRDFLGGFGFN
GDMALSPVAPFSGGEKARLVLALLVWQRPNLLLLDEPTNHLDLEMRHALTLALQTFEGAM
VIVSHDRHLLRLTCNDYYLVEGGEVSTFDGDLDDYHQWLLDAAKAAASRATSNDNERPAV
DKKQQKRLEAELRQKLSPLKKQQDKLEQQQQKLAQRLSELEQRLADTSLYEAANKAELTQ
ILAERTTLGQQQEESEMAWLELQEQIDAIELEAMG
NT seq
1908 nt
NT seq
+upstream
nt +downstream
nt
atgatcaccctgtcccaggcccagcttatccgcggcagcaaagtcttgctggatgaggcc
aatctcaccatttaccccggccacaaagttggtctggtcggcgccaacggcaccggcaag
tcatcacttttagccctgattatggacaagctgacgctggataagggtgagctgcaggta
ccgcgcgagtggcgcattgcctcggtagcacaggagacaccggcgctggatgtctcggcg
cttgagtacgtgctggatggcgataccgaatttcgcgagctggaagccgacctgcgtcag
gccgaggccgacaacgatggccatgccattgcgctgctgcacggcaagctcgatgccatt
ggcggctacagtatccgcgcccgtgccggcgcactgctggcgggcttgggctttagcgaa
gacaagcaatcatcaccggtgaagagcttctccggtggctggcggatgcgtttgaacctg
gcccaggcgctgctgtgccgctcggatctgctgctgcttgacgaacccaccaaccacctg
gatctggacaccatgttctggctggaagactggattaaagcctacccgggcaccctggtg
ctgatcagccacgaccgtgactttatcgatgccattgtggatgaaatcgtccatgtagag
cagcaaaaactcaattattacaagggtaactactccaccttcgagcgtacccgcgccgag
cgtatggcgcagcagcaagtcgctttcgagcgtcagcagcgcgaacgcgcccatatgcaa
tccttcgtcgaccgtttccgctataaggccagtaaggccaagcaggcacaaagccggtta
aaggcgctggagaagatgaccgagctgttgcccgccaaggccgacagccagtttcatatg
gcatttcgtgagcccgccagtctgcccaatccattggtggccatggaaaacgtgtctgtg
ggttatggcgacaccccaatcctgggtaaggtgcatctgaacctggtgccgggcgcgcgt
atcggtttgctcggccgcaacggcgccggtaaatcgaccctgattaaactgctcgccagt
gagcttaagccgatgaccggccgttatgagcccaaccccggccttaacatcggctacttt
gcccagcatcagctggaatacctgcatctggatgactcgccgctgatgcacctgcagcgt
ctggcgcctactcatcgcgagcaggagctgcgggacttcctcggcggctttggctttaat
ggcgacatggcgctgtcgccggttgcccccttctctggcggcgaaaaagcccgtctggtg
ctggcgctcttggtatggcaacgccccaatctgctgctgcttgacgaaccgaccaaccac
ctggatctggaaatgcgccacgccctgacgctggcactgcaaacctttgaaggcgctatg
gtgattgtgtcccacgacaggcatctgttaaggttgacctgcaacgattattatctggtc
gaaggcggcgaagtcagcacctttgacggtgatttggacgattaccatcagtggctgctg
gatgcagccaaagcggcggcatcccgtgccaccagcaacgacaatgaacgtcctgccgtc
gataagaaacagcaaaaacggctggaagccgaactcagacaaaagctctctccgctgaaa
aagcagcaggacaagctggaacaacaacagcaaaaactggctcaacgcctgtcggaactg
gaacaacgcctcgccgacaccagcctttacgaggccgccaacaaggccgaactgacccaa
atcctggccgaacgtactacccttggtcagcaacaggaagaaagcgaaatggcctggctg
gagttacaggaacaaattgatgccatcgaactggaggccatgggctga
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