Shewanella khirikhana: STH12_02916
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Entry
STH12_02916 CDS
T06711
Symbol
crp
Name
(GenBank) cAMP-activated global transcriptional regulator CRP
KO
K10914
CRP/FNR family transcriptional regulator, cyclic AMP receptor protein
Organism
skh
Shewanella khirikhana
Pathway
skh02020
Two-component system
skh02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
STH12_02916 (crp)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
STH12_02916 (crp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_02916 (crp)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
CRP/FNR family
STH12_02916 (crp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
cNMP_binding
HTH_Crp_2
Crp
HVO_A0261_N
RepL
HTH_28
HTH_24
MarR_2
HTH_ParB
HTH_23
MarR
Sigma70_r4
bAvd
HTH_11
GntR
TrmB
HTH_7
HAV_VP
Motif
Other DBs
NCBI-ProteinID:
AZQ11985
UniProt:
A0ABN5U0E3
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All DBs
Position
3313995..3314630
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AA seq
211 aa
AA seq
DB search
MALIGKPKPDPTLEWFLSHCHIHKYPAKSTLIHAGEDSDTLYYIVKGSVAVLIKDEEGKE
MILSYLNQGDFIGELGLFEEQAERTAWVRAKQACEIAEISYKKFKQLIQVNPEILMKLAA
QMAVRLQSTSQKVGDLAFLDVAGRIAQTLLHLARQPDAMTHPDGMQIKITRQEIGQIVGC
SRETVGRILKMLEEQNLIQAHGKTIVVYGTR
NT seq
636 nt
NT seq
+upstream
nt +downstream
nt
atggcactgattggcaaacctaaacccgatccaactctggaatggtttttatcccactgt
cacattcacaagtatccggccaagagtaccttgatccacgccggtgaagactcagatacc
ctctactacatcgttaagggttctgttgcagtactgattaaggatgaagaaggcaaggag
atgatcctgtcttatctgaatcagggcgactttattggtgagctgggtctgtttgaagaa
caagccgagcgtactgcctgggttcgcgccaagcaggcctgtgaaatcgctgaaatttct
tacaagaaattcaagcaactgattcaggtgaatccagaaatcctgatgaagctggccgcg
caaatggctgtgcgtctgcaaagcaccagccagaaggtaggcgatctggccttcctcgac
gtagccggtcgcatagctcagactctgctgcacctggcccgtcagccagatgccatgacc
cacccggacggcatgcaaatcaagatcacccgtcaggaaatcggtcagatcgtgggttgt
tcacgcgagaccgtaggtcgcatccttaaaatgcttgaagaacaaaatcttatccaagct
cacggcaaaaccatcgtggtgtacggcacccgttga
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