Shewanella khirikhana: STH12_02975
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Entry
STH12_02975 CDS
T06711
Symbol
dus
Name
(GenBank) putative tRNA-dihydrouridine synthase
KO
K05539
tRNA-dihydrouridine synthase A [EC:1.-.-.-]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
skh03016
]
STH12_02975 (dus)
Transfer RNA biogenesis [BR:
skh03016
]
Prokaryotic type
tRNA modification factors
Dihydorouridine synthases
STH12_02975 (dus)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Dus
DHO_dh
SOR_SNZ
Motif
Other DBs
NCBI-ProteinID:
AZQ12039
LinkDB
All DBs
Position
complement(3369878..3370858)
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AA seq
326 aa
AA seq
DB search
MPSPINRTFSVAPMLDWTDRHYRYFARLMSNEALLYTEMVTTGAILHGKGDYLEYNQEEH
PLALQLGGSNPADLAACARLAEARGYDEVNLNVGCPSDRVQNGRFGACLMAEPKLVAECV
EAMRQQVSIPVTVKTRIGIDEQDSYEFLTDFIDTVAAAGCDTFIIHARKAWLQGLSPKEN
REIPPLDYDRVYQLKQDYPQLSISINGGVTSIDAAKTHLERLDGVMVGREAYQNPFILAE
VDSALCGKTSPVQSREEVIGKLLPYIGKHLEQGGRLNHISRHIIGLYQGIPGSRAWRRHL
SENAHKPGAGIEVIENALKAMEDNGL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgccaattaatcgcaccttctccgttgcgcctatgctcgactggaccgacagg
cactaccgctattttgcccgtctgatgtccaacgaggcgctgctgtacaccgaaatggtc
accaccggggcgattctgcacggcaagggcgactatcttgagtacaaccaggaagagcat
ccgttggcactgcaactgggtggctccaaccctgccgatttggcggcctgtgccaggctc
gccgaagcacgcggctatgatgaggtaaacctgaacgtcggttgcccctcggatcgggta
cagaatggccgtttcggcgcctgcctgatggccgagcccaaattggttgccgagtgcgtc
gaagcgatgcgccagcaggtgtcgattccagtaacggtcaagacccgtattggcatagat
gagcaggactcttacgaatttctcaccgactttatcgacacagttgccgcagctggctgc
gatacctttatcatccatgcccgtaaagcctggctgcagggattgagcccgaaagagaac
cgcgaaattccgccgctggactacgaccgcgtgtatcagctcaagcaggactacccacag
ctttccatcagcattaatggtggcgtgacctcgattgatgcggccaaaacccatcttgag
cggctcgatggcgtgatggttggacgcgaagcctatcaaaacccatttattctggctgaa
gtcgacagtgccctctgcgggaagacctcgccggtccaaagccgggaagaggttatcggg
aaattacttccttatatcgggaaacaccttgagcaaggtggcagactcaaccatatcagc
cgacatatcataggtttatatcagggcattccaggctcacgcgcctggcgccgtcacttg
agtgagaacgctcacaagccgggcgccggtatcgaagtgattgaaaatgcactgaaagca
atggaagacaacggcctttaa
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