Shewanella khirikhana: STH12_02977
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Entry
STH12_02977 CDS
T06711
Symbol
alr
Name
(GenBank) Alanine racemase, biosynthetic
KO
K01775
alanine racemase [EC:
5.1.1.1
]
Organism
skh
Shewanella khirikhana
Pathway
skh00470
D-Amino acid metabolism
skh01100
Metabolic pathways
skh01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
STH12_02977 (alr)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
STH12_02977 (alr)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
skh01011
]
STH12_02977 (alr)
Enzymes [BR:
skh01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
STH12_02977 (alr)
Peptidoglycan biosynthesis and degradation proteins [BR:
skh01011
]
Precursor biosynthesis
Racemase
STH12_02977 (alr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Motif
Other DBs
NCBI-ProteinID:
AZQ12041
UniProt:
A0ABM7DQS1
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All DBs
Position
complement(3371591..3372667)
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AA seq
358 aa
AA seq
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MKPFPRAEISSRALKANLARLREIAPGSKVMAVVKANGYGHGLLNVAEVVNDADGFGLAR
LEEALEVRAGGVNARLLLLEGFFRTEDLPLLVEHDIDTVVHHESQLAMLESVSLETPVTV
WLKVDSGMHRLGFHPEDFEQVYQRLQANANVAKPVHLMTHFSCADEPDNQVTAAQMTRFQ
QVTEGLPGDKTLANSAGVLYWPDSQADWIRPGIALYGVSPVAGDLGANHGLQPAMALMSQ
LIAVREHKAGESVGYGAYWTSSRDTRLGVVAIGYGDGYPRNAPEGTPVLINGRRVPIVGR
VSMDMLTVDLGPDANDKVGDAAMLWGPDLPVEEVAEQIGTIAYELVTKLTPRVAVCLD
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgaaaccctttccccgcgcagaaatcagtagtcgcgcgctgaaagccaaccttgcccgg
cttcgggaaattgcccccggcagtaaggttatggcagtggtaaaggccaacggttatggt
catggcctgctcaatgttgccgaggtcgttaatgatgccgatggttttggtctggcacgc
ctcgaagaagcattggaagtacgcgccggtggcgtcaatgccaggctgctgttgctggaa
ggctttttccgcaccgaagacttgccattgctggtggagcacgatatcgacaccgtggtg
caccatgaatcacagcttgcgatgctggagtcggtgagcctggaaacaccggttacagtg
tggctgaaagtagactccggcatgcaccgtctcgggtttcatccggaagattttgagcag
gtgtaccagcgtttacaggccaacgccaacgtggccaagccggtgcatctgatgacccat
ttcagctgcgccgacgagccagacaaccaggtgacagcggcgcagatgacgcgttttcag
caagttaccgaaggcctgcccggcgataaaaccctggccaactccgccggagtgctttac
tggcccgacagccaggccgattggatcagaccggggattgctttgtatggcgtatcgcca
gtcgcaggggatttgggcgccaatcacggtttgcagccagctatggcgctgatgtctcag
ctgattgccgtgcgtgagcataaggccggtgagagtgttggttatggcgcttactggaca
tccagccgcgatacccgccttggtgtggttgccataggttatggcgacggttacccccgt
aatgcccccgaaggcacgccggtacttatcaatggccgaagggtgccgatagtgggacgg
gtctccatggacatgctgacggtggatttggggcccgatgccaatgataaggtcggtgat
gccgccatgttgtgggggccggatttgccggtagaggaagtggcagagcagattggtact
atcgcctatgagctggtgaccaagctgaccccgcgggtggctgtttgcctggattaa
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