Shewanella khirikhana: STH12_03024
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Entry
STH12_03024 CDS
T06711
Symbol
gmr_12
Name
(GenBank) Cyclic di-GMP phosphodiesterase Gmr
KO
K20962
c-di-GMP phosphodiesterase [EC:
3.1.4.52
]
Organism
skh
Shewanella khirikhana
Brite
Enzymes [BR:
skh01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.52 cyclic-guanylate-specific phosphodiesterase
STH12_03024 (gmr_12)
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GFIT
Motif
Pfam:
EAL
GGDEF
GAF
GAF_2
Motif
Other DBs
NCBI-ProteinID:
AZQ12088
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Position
3414852..3416756
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AA seq
634 aa
AA seq
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MAQIDTRTISVPASMLEGWQEIVDLVADITECPAALIMRIHAKEMEVFSTSRSSGNPYAP
HARDDLGHGLYCETVIKERRPLVVPNALNDPEWDHNPDIKLGMICYCGLPIFWPDDTPFG
TICILDSKERHFSDRTYSLLGRFQSAIEGHLQVLYHKAEVQALNQELEAKVRERTQSLAE
LSARLLKEIEQRTAAEGHLEFHRSYDALTHLPNRATLTQRLQEMLPVIKDDEQLTLIYFG
LKNFKSVNDSYGYLAGDQILVSLAQRLSMKLPDDWILSRIAGAEFVLAARHDRNPDLAEQ
VIERILHDCSIPFSVNDNSITVKTNLGVALAPMDATDSVSLLQRASAAMSISKKEGAGVS
YFGKETQKAANERLLLESHLLDALRLDELHVYFQPLMCLRQGGKIIGAEALLRWHSPELG
NVGPDRFIPLAESNGQIIEIGNYVLHQALKQAARWHLLTEQPFKVAINISPLQFRERHFV
EHIDDLLKLYQLPPQSLELEITEGILLQDEHHAKTSLARLRQLGVSISLDDFGTGYSSLS
YLQKYAFDTLKIDRSFVSHLEFNEQNRELTRAIIAMAHKLNLAVIAEGVENAFQEAFIRD
EGCDYAQGFLYGKAVASEHFEAMLLTQNDRDIGS
NT seq
1905 nt
NT seq
+upstream
nt +downstream
nt
atggctcaaatagacacccgaacaatttcagtacccgccagcatgctggaaggctggcag
gaaatcgtggatctggtggccgacatcaccgagtgtccggccgcactcatcatgcgtatc
cacgcgaaagaaatggaagtcttttcaaccagtcgcagcagcggcaatccctatgcaccc
catgcccgtgatgatctggggcacggcctctattgtgagactgtgatcaaagagcggcga
ccactggtggtccccaatgctcttaacgatcccgaatgggaccacaaccccgatatcaag
ctggggatgatttgctattgcggtctgcccatcttttggccggacgacacccccttcggc
accatctgtattctcgacagcaaagagcgccacttcagcgaccgcacatactcgctgctc
gggcgctttcaatcggccatcgaaggtcacttgcaggtgctgtatcacaaggccgaagta
caggcgctgaatcaggaactggaagccaaggtgcgggagcgcacccaaagcctggccgaa
ctcagtgcccggctgctaaaagaaattgaacagcgcaccgccgccgaaggtcatctggag
tttcaccgcagctacgatgcactgacgcacctgcctaaccgtgccaccttaacccagcgg
ctgcaggaaatgctgccggtgattaaggacgacgaacagctcaccctgatttatttcggc
ctgaaaaacttcaaatcggtgaacgacagctacggctatctggcgggggatcaaattctg
gtcagcctcgcccagcggctgagtatgaagttacccgatgactggattttatcgcgcatt
gccggcgccgaatttgtgctggcggccaggcacgacagaaacccggaccttgccgagcag
gtgattgaacgcattctgcacgactgttcaatcccgttcagcgtcaacgacaacagcatc
acagtgaaaaccaaccttggtgtagcactggcgccgatggatgccacggattcggtgagt
ttgctgcaacgggccagcgccgccatgagtatcagcaaaaaggaaggcgccggggtctct
tactttggtaaagagacccaaaaggccgccaatgagcggctgctgctggagtcccacctg
ctcgatgcgctgcgccttgatgagctgcacgtctattttcagccgctgatgtgcctgcgt
cagggcggcaaaatcatcggcgccgaggccctgcttcgctggcacagccccgagcttggc
aatgtcggacctgaccgctttattccactggccgaaagcaacggccagatcattgagatt
ggcaattatgtgctgcatcaggcgcttaagcaggcggcacgctggcatctgctgaccgag
cagccattcaaggtcgcgataaacatttcaccattgcagtttcgcgagcgccattttgtg
gagcacatcgacgacctgctcaagctgtatcaactgccgccccagagcctggagctggaa
attaccgaaggcatactgctgcaggatgaacatcacgccaaaaccagcctcgccagactg
cgccagcttggggtcagcatctcgctggatgactttggcaccggctactcctccctcagt
tatctgcagaaatacgccttcgataccctgaaaatcgatcgcagctttgtcagccatctg
gagttcaacgagcaaaaccgcgaactgacccgcgccattatcgccatggcgcacaaactg
aatttggcggtgatagcagaaggggtggaaaacgcctttcaggaagcctttattcgcgac
gaaggctgtgattatgctcaggggtttctgtacggcaaggcggtggccagcgagcatttt
gaagccatgctgctgacacaaaacgaccgtgatattggcagttaa
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