Shewanella khirikhana: STH12_03034
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Entry
STH12_03034 CDS
T06711
Symbol
ompA_2
Name
(GenBank) Outer membrane protein A precursor
KO
K03286
OmpA-OmpF porin, OOP family
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_03034 (ompA_2)
Transporters [BR:
skh02000
]
Other transporters
Pores ion channels [TC:
1
]
STH12_03034 (ompA_2)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OMP_b-brl
OmpA_membrane
OmpA
Porin_7
Phenol_MetA_deg
OprF
Motif
Other DBs
NCBI-ProteinID:
AZQ12098
LinkDB
All DBs
Position
complement(3425311..3426330)
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AA seq
339 aa
AA seq
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MKKSMIALALIAATSYANAAAPESGFYFGAGAGQTDFNNVSTDSHLKDGDDTAWNAVAGY
QLNKYFAVEAGWQDLGTLDATDMRGAAAQGQNIDVSGATLGIVGTLPLSEKWFLTGEAGA
YQYHLEHQMGVGKYVSATDTSPYVGAGIGYRITDNMDVTAKYRRFTDIDETAWETAHMDA
ETVGVQLTYRFGAKPTPVAVVAPVVEPAPQPEPVEPKYETKVESASVAVLFGFDSAALTG
EGQAKLDQIVDLSKQNDKDAIVLIGQADNQGDASYNQMLSEKRVATVTDYLASHGVDVQS
MDQRAEGETQAHGDSINERQLERRVIVTLTAEKQIQVAP
NT seq
1020 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagtcaatgattgcactggccctgattgctgctacctcttatgccaacgccgca
gcacctgagagcggtttctacttcggcgccggcgccggccagactgacttcaacaatgtc
agcaccgacagccacctgaaagacggtgacgacaccgcctggaatgctgttgcaggttat
caactgaacaaatattttgccgtcgaagctggctggcaagacctgggcaccctggatgcc
accgatatgcgcggtgcagcagctcaggggcagaacatcgacgtgagcggtgccaccctc
ggcattgtgggtaccctgccactgtctgaaaaatggtttttgaccggtgaggcgggtgcc
tatcagtaccacctcgagcaccagatgggcgtgggcaagtacgtgagtgccactgacacc
tctccctatgtgggcgccggtatcggctatcgcatcaccgacaatatggacgtgactgcc
aagtaccgccgtttcaccgacatcgatgaaaccgcatgggaaaccgcccatatggacgcc
gaaaccgttggcgtgcagctgacctaccgctttggcgccaagccaaccccggttgccgtg
gtggctcctgtggtggaaccagcgcctcagccagagccggttgaacccaagtacgaaacc
aaagttgaaagcgccagtgtggcggtactgtttggcttcgattcagccgccctgaccggt
gaaggtcaggccaagctggaccaaatcgtggacctgtcgaagcaaaacgacaaagacgcc
attgtgcttatcggtcaggccgacaaccagggcgatgccagctacaaccagatgctgtct
gagaagcgtgttgccacagtgaccgattatctggccagccacggtgttgacgtgcagtcc
atggatcagcgcgccgaaggtgaaactcaggcccatggcgacagcatcaatgaacgtcag
ctggagcgccgtgtgattgtgaccctgactgccgaaaagcaaatccaggtagcgccttaa
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