Shewanella khirikhana: STH12_03056
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Entry
STH12_03056 CDS
T06711
Name
(GenBank) hypothetical protein
Organism
skh
Shewanella khirikhana
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_5
RCC1_2
Cadherin_4
Motif
Other DBs
NCBI-ProteinID:
AZQ12120
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All DBs
Position
3457612..3460980
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AA seq
1122 aa
AA seq
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MHHGVPPIILLFLLLFLGACTGGETATPLLVNEAPPAAPQAAPVTLSLTPLVADTQVGQT
LTVDVSAAVQSNADWQLVRAAAKDNLSQVLTTQEKSFSVKATAAGLSQVEFQVSAAGMAT
SAMLYVAISAPDNQAPVAANKALTTDSNTPVSVDLASLISDPESDSLSIQSLLQTAERFS
LDGFVLTFTPAGFVGTDAASYVVEDARGALAVAQVVVSSSDATVRISNTAPTAKDYQVAM
DSAEVLTIDLEALGLIADVDGDSLSLSLYGGNARAAVDGLSIRYTPAGFVGTEELVYVVS
DNQGGSAIATIRLLVSDNTPANTQPLAGDLSLSISLAQVLASASQTIDISAIVSDADGDE
LTLSSLYGSLNTALISSALTIDYHASADTANDSLVYVISDGRGGLAQGTIYIAIANTAPT
AQAISASVDPYAGGSIGIDLSLYTSDSDGDTLTLSHLDSPTTPSTLSASGLMLTFTPNGY
VGTQSLRYEVSDGQKSATNLLTLVSASTASLSANDINLAAIAMDAGQQSIDVSAYVSNSS
GRSMRLVSVSGAGFGTTALSASPLTFYYTPSDISYGDETLTYRITDDEGHFAEANVSISL
TAPTTPVITALTLNYAGSISASLSCSDCDHPGNSSFQFEVDGLPVSGSNNSYSPQGDDKD
KRTGVVATVRNRYCNTDNTGVNGGNACRFARGQTIIETRYPKTISSSLRAHAALRSDGSV
LCWGNSGNGGDCSAVQSDLVDITAIAHTDWAFAALKTDGTVEVWGNTLYGGDNSAGAKAL
RVDVAKIYGNEVAFAAVKNDGTVVTWGNVGDGGNSASVQSSLTDVEHISASARAFAALKG
DASVISWGNALYGGDSSAVSADLVSVKQTQATLFAFAALKYDGTVVAWGDTTNGGDASVV
QAQLTNVAAIYPNWRAFAAVKADGSVVTWGNSLYGGDSSSVSAQLTNVVSIAHTTHAYAA
LKADATVVTWGAASIGGNSAAVQAQLINVESIASTQGAFAAIKDDGSVVTWGSAAAGGDS
SAVQTELTNVVSITGNEGAFAALKADGSVVTWGNAVDGGDSSAVAGQLVAVEKLYANSRS
FVALKEDGSLLSWGDATRGGDSSAIQSQTLSATTVYTELALP
NT seq
3369 nt
NT seq
+upstream
nt +downstream
nt
atgcatcacggcgtaccacctattattttgctgtttttattgctgtttctcggcgcctgc
accggtggcgagaccgccacgccgctgctcgtcaacgaagcgccccccgccgccccccag
gccgcacctgtcaccctgagcctcacgccgctggttgccgacacccaggttggccaaacc
ctgactgtcgatgtatcggccgccgtacaaagcaatgctgactggcagcttgtccgggcc
gccgccaaagataacctcagccaggtactgaccacgcaggaaaaaagcttcagcgtaaag
gcaactgctgccgggctgtctcaggtggaatttcaggtaagcgccgcaggcatggccacc
agcgccatgctgtatgtggccatcagcgccccggataatcaggcaccggtggctgccaac
aaggcgctgaccaccgacagcaacaccccggtcagtgtcgatttggccagcctgataagc
gatcccgagagcgatagcctcagtattcagtcgctgctgcaaacagctgagcgcttcagc
ctcgatggctttgtgctcacctttaccccggcgggatttgtcggcacagacgcggccagt
tatgtggtggaagatgccaggggcgccctggcggtggcgcaggtggtggtatccagcagc
gatgccactgtgcgaatcagcaacacagcgccaacggccaaagactatcaggttgcgatg
gacagcgccgaggttctgaccatcgacctcgaagcgcttggcttgattgccgacgtagac
ggcgacagcctcagcttaagcctttatggcggcaacgcccgcgccgctgttgatggtctc
agtattcgctacacccccgcaggctttgtgggcaccgaagagctggtgtatgtggtcagc
gacaaccagggcggcagcgccattgcgaccattcggctgctggtgtcggacaatactccg
gccaacacgcagccgctggctggcgatctgagcctgagtatctcgctggcacaggtgctg
gcatccgcaagccagaccatagatatcagcgccattgtcagcgacgccgacggtgacgag
ctgaccctctccagcctttacggcagcctgaatacggcactgataagctcggcgctgacc
atcgattatcacgcctcggccgataccgccaatgacagcctggtgtatgtcatcagtgat
ggccgcggcggcctggcgcagggcacgatatacattgccattgccaatacagcaccgact
gcacaggcgataagcgccagcgtcgatccctacgccggtggcagtatcggcatcgatttg
agcctctacacctctgactccgatggcgatacattaacgctgtcgcatctggactcgcca
acaacgccctccaccttaagcgcctcgggactaatgctcacctttacccccaatggctac
gtaggcacccagtcactgcgctatgaagtcagcgatggccagaagtcggctaccaacctt
ctcaccctggtgtccgcctccactgccagtctcagtgccaatgacatcaaccttgctgcc
attgccatggacgccggccagcagagcattgatgtgtcagcctatgtgtccaacagcagt
ggtcgcagcatgcgtctggtttcggtcagtggcgccggctttggcaccacggccctgtcg
gcatcgccgctgacgttctactacaccccgagcgatatcagctatggcgatgaaaccctg
acttaccggataaccgatgatgagggccattttgccgaggccaatgtcagcatcagcctg
acggcaccaacaacgccggtgatcacggctctgaccctgaactacgcgggcagcatcagc
gccagcctcagttgcagtgactgcgaccatcccggcaacagcagcttccagtttgaggtt
gacggtctgccggtcagcggcagcaacaacagctacagcccccagggcgatgacaaagac
aaacgcacaggcgtggtcgccaccgtgagaaaccgctactgcaataccgacaacaccggc
gtcaacggtggcaatgcctgccgatttgcccgtggccaaaccatcatagagaccaggtat
ccgaagaccatcagctcatcgctgcgggcccatgcggcgctaagaagcgacggctcagtg
ctgtgctggggcaacagcggtaatggtggcgattgcagcgcggtgcaaagtgacttagtg
gatatcaccgccatcgcccataccgactgggcctttgcggcgctgaaaaccgacggcact
gtggaagtgtggggtaataccctctatggcggcgacaactcggccggggctaaagcgctc
agggtagatgtggccaaaatttatggcaatgaagtggccttcgcagcggtgaaaaacgac
ggcacagtggtgacctggggcaatgtcggcgacggtggtaacagcgcatcagtgcagtcc
agccttaccgatgttgaacacatcagcgccagcgcccgcgcctttgctgccctcaaaggc
gatgccagcgttatcagctggggcaatgccctctatggcggtgacagcagtgcggtgagc
gccgatctggtgtcagtcaaacaaacccaagccaccctgtttgcctttgccgcgcttaaa
tacgatggcactgtggtggcctggggcgataccaccaatggcggcgatgccagtgtcgtg
caggcgcagctgaccaatgtggctgctatctatcccaactggcgcgcctttgctgccgtt
aaagccgacggcagcgtagtcacctggggcaattcgctctatggcggcgacagcagcagt
gtctcggcccagctgaccaatgtggtcagcatcgcgcataccacccacgcctacgccgcg
ctgaaagccgacgctaccgtggtcacctggggcgccgccagcattggtggcaacagcgcc
gccgtacaggctcagcttatcaatgtggagtccatcgccagcacccagggcgcctttgcc
gccatcaaagacgatggctcagtggtcacctggggttcggccgctgccggaggcgacagc
tcggccgtgcagactgagctcaccaatgtggtcagcattaccggcaacgaaggcgccttt
gccgccctcaaggccgatggctcagtggtcacctggggtaacgcggtcgatggcggtgac
agcagtgcggttgcgggccaattggtggcagtcgaaaagctctatgccaacagccgaagc
tttgtcgccctcaaagaagacggcagcctgctcagttggggcgatgccacccggggcggc
gacagcagtgccattcaatcgcaaaccctctctgccaccacggtttacaccgaactcgcc
ttgccctga
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