Shewanella khirikhana: STH12_03095
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Entry
STH12_03095 CDS
T06711
Symbol
nemR
Name
(GenBank) HTH-type transcriptional repressor NemR
KO
K16137
TetR/AcrR family transcriptional regulator, transcriptional repressor for nem operon
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_03095 (nemR)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
STH12_03095 (nemR)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TetR_C_13
TetR_N
TetR_C_7
TetR_C_13_2
DUF5662
MC2
TetR_C_24
BTG
Motif
Other DBs
NCBI-ProteinID:
AZQ12159
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Position
3504121..3504711
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AA seq
196 aa
AA seq
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MNTKTQDTRQHILDIGYQLVVSKGFAGVGLSELLKTAEVPKGSFYHYFKSKEQFGEALIQ
AYFSEYLNQLNLLLDSASGNHYQKLMHYWQHWSEQNSCQGQAGKCLVVKLAGEVSDLSEP
MRLALLNGTNRIIARVAECIEQGRAAGELGISDSRQTAEQLYNLWIGASLLNKIRLDDAS
LAQALLTTRQILQPTA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaaaacccaagacacccggcaacacatactcgacattggctaccaactggtg
gtcagcaaaggctttgccggtgtgggcctgtcggagctgctgaaaaccgccgaagtgccc
aagggctccttctatcactacttcaaatccaaggagcagtttggcgaagcattgatccag
gcctatttcagtgaatacctgaatcagctcaacctgttgctggacagcgcctccggcaac
cactaccagaagctgatgcactactggcagcactggagcgagcaaaacagctgtcagggc
caggctggaaaatgcctggtggtgaaacttgccggtgaagtgtccgatctatccgagccc
atgcgcttggcgctgcttaacggcaccaatcgcatcatagcgcgggtggccgaatgcatc
gaacaggggcgcgctgcaggcgagcttggtatcagcgacagccgccagaccgccgagcag
ctttacaacctgtggattggcgccagcctgctgaacaagatacgcctggatgatgccagc
ctggcgcaggctcttttgaccaccagacaaatattacagcccacggcctga
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