Shewanella khirikhana: STH12_03129
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Entry
STH12_03129 CDS
T06711
Symbol
hlyB
Name
(GenBank) Alpha-hemolysin translocation ATP-binding protein HlyB
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
skh
Shewanella khirikhana
Pathway
skh02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
STH12_03129 (hlyB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_03129 (hlyB)
02044 Secretion system [BR:
skh02044
]
STH12_03129 (hlyB)
Transporters [BR:
skh02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
STH12_03129 (hlyB)
Secretion system [BR:
skh02044
]
Type I secretion system
Adhesin protein transporter
STH12_03129 (hlyB)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
AAA_21
SMC_N
AAA_30
AAA_25
ATP-synt_ab
AAA_16
DUF4191
Motif
Other DBs
NCBI-ProteinID:
AZQ12193
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All DBs
Position
3547070..3549172
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AA seq
700 aa
AA seq
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MSADFHHSRAFISQCCAAMGMTPPAGQLAELMAGLTPETLEEILGRFQLGASLQKLPPAD
MALPAILFVDGAPWLARRRTKEGVLLESPDGEQRQLAHNEWQTTCEGRSWYLQARELADY
RATEHQQSRPRHYLAEAFDEMRPFLKSFLLASFAANLLALVTPLFTMNVYDRVVPNQATD
TLWVLASGVCVAMLFDFLLRQSRARLADVAGKHVDQQVSAKLFDRLLGMRLEHRPASAGA
FAKQLQEFDSIRDFLTSATLVALVDLPFTVLFLALMAWLGGWMVMVPVLAMLCLIGMSLI
LERRIAAAVEKSGQLSTQKQAHLIETLNLLPELKQAGAQHKAQRLWDANIRELADWQNES
RIASNTLSHLVAASQQLVTVGLVVTGVYQIYAGNISMGALIAMVMLSGRAASAINQIAIL
LLKYRQTRAAMTAVESILALPQETRAQSLNAGKLGFDGSVALRNASFSYPDQPMPAFSDI
NLSIQPGERVGLFGAAGAGKSSLLSVLAAQYQPSSGQLFYHGLEASQWSQDYLRRHIGWV
GQQPLLSYGTVLDNLLLGLTEVDEQKLARVLVTSGIDKLLDRMGAGLSTQVGEFGRQLSG
GQRQAILLGRALLREPKLLLLDEPTSALDERAENQIIASLKALERDVTLVIASHQPKVLA
MCDRVLIVDKGRIVAEQRPSELQGNKRLKSVSVTRREAKQ
NT seq
2103 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgacttccaccacagccgtgcctttatcagccaatgctgcgccgccatgggg
atgacacctccggcggggcaactggctgagctcatggccgggctgacgcctgagacgctg
gaagagatcctcgggcgttttcagctgggcgcttcgctgcaaaaactgcctccggcggat
atggcgctgcccgccattctttttgtggatggcgccccctggctcgccagacgcagaacc
aaagaaggcgtgctgctggaatcccccgacggtgagcagcgccagcttgcccacaacgag
tggcaaaccacctgcgagggccgcagctggtatttgcaggcccgggaacttgccgactac
cgcgccaccgagcatcagcaaagccgcccgcgccattatctggccgaggccttcgatgag
atgcgccccttccttaaaagctttttgctggcgtcctttgccgccaacctgctggcgctg
gtgacgccgctctttaccatgaacgtgtatgaccgggtggtgcccaatcaggcgaccgat
accctgtgggtgctggcaagtggcgtgtgcgtggccatgctgttcgattttctgctgcgt
caatccagagcgcgactggccgatgtagcgggcaaacacgtagatcaacaggtttccgcc
aagctgttcgaccgcttgctgggcatgcggcttgagcacagacccgcttcggcgggcgcc
tttgccaagcagttgcaggagtttgattcaattcgggatttcctcaccagcgccaccctg
gtcgccctggtcgacctgccctttactgtactgtttctggcgctgatggcctggctcggt
ggctggatggtgatggtgcccgtgcttgccatgctgtgcctgattggcatgagccttatt
ctcgagcggcgcattgctgcggcggtggaaaagtcaggccagctgtctacccaaaagcag
gcgcacctcatcgagaccctgaacctgctgccggaactcaaacaggccggagcccagcac
aaggcccagcggctgtgggatgccaatatccgcgagctggccgactggcagaatgagtcg
cgcatcgcctccaataccctgagccacctggtggcggccagccagcagctggttactgtg
ggcttggtggtcacaggggtgtatcagatttatgcgggcaacatcagcatgggcgccctg
attgccatggtgatgctcagtggccgcgccgcgtccgccattaaccaaattgcaattctg
ctgctcaaataccgtcagacccgcgctgccatgacagccgtagagtccatcctcgccctg
ccccaggagacccgcgcccagagcctgaatgccggaaaactgggattcgatggctcggtg
gcactgagaaacgccagtttcagctaccccgaccaacccatgcctgctttcagcgacatc
aacttaagcattcagccgggtgagcgtgtcggcctgtttggcgccgcaggcgctggcaag
tcgagcctgctgtcggtcctcgccgctcaatatcagccctccagcggccagctgttttat
cacggcctcgaggcttcccagtggtcgcaggactatctgcgccgccatatcggctgggtc
ggccagcagccgctgctgagctacggtactgtgctggataacctgctgctggggctaacc
gaagtggacgagcaaaaacttgcccgggtgctggtgaccagtggtatagacaagcttctc
gatcgcatgggcgccggactttccacccaggtgggggaatttggtcgccaactctccggc
ggtcagcgtcaggcaattttgcttggccgggccctgctgcgtgaacccaaactgctgctg
ctcgatgagcccaccagcgccctggatgaacgggccgagaatcaaattatcgccagcctc
aaggcactggagcgggacgtgaccctggtgattgcctcccaccagcccaaggtgctggcc
atgtgcgaccgggtgctgattgtcgataagggccggattgtggccgagcagcgtccatca
gagctgcaaggtaataaacgtctcaagtcggtaagcgttacccgcagggaggccaagcaa
tga
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