KEGG   Shewanella khirikhana: STH12_03129
Entry
STH12_03129       CDS       T06711                                 
Symbol
hlyB
Name
(GenBank) Alpha-hemolysin translocation ATP-binding protein HlyB
  KO
K12541  ATP-binding cassette, subfamily C, bacterial LapB
Organism
skh  Shewanella khirikhana
Pathway
skh02010  ABC transporters
Brite
KEGG Orthology (KO) [BR:skh00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   02010 ABC transporters
    STH12_03129 (hlyB)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:skh02000]
    STH12_03129 (hlyB)
   02044 Secretion system [BR:skh02044]
    STH12_03129 (hlyB)
Transporters [BR:skh02000]
 ABC transporters, eukaryotic type
  ABCC (CFTR/MRP) subfamily
   ABCC-BAC subgroup
    STH12_03129 (hlyB)
Secretion system [BR:skh02044]
 Type I secretion system
  Adhesin protein transporter
   STH12_03129 (hlyB)
SSDB
Motif
Pfam: ABC_tran ABC_membrane AAA_21 SMC_N AAA_30 AAA_25 ATP-synt_ab AAA_16 DUF4191
Other DBs
NCBI-ProteinID: AZQ12193
LinkDB
Position
3547070..3549172
AA seq 700 aa
MSADFHHSRAFISQCCAAMGMTPPAGQLAELMAGLTPETLEEILGRFQLGASLQKLPPAD
MALPAILFVDGAPWLARRRTKEGVLLESPDGEQRQLAHNEWQTTCEGRSWYLQARELADY
RATEHQQSRPRHYLAEAFDEMRPFLKSFLLASFAANLLALVTPLFTMNVYDRVVPNQATD
TLWVLASGVCVAMLFDFLLRQSRARLADVAGKHVDQQVSAKLFDRLLGMRLEHRPASAGA
FAKQLQEFDSIRDFLTSATLVALVDLPFTVLFLALMAWLGGWMVMVPVLAMLCLIGMSLI
LERRIAAAVEKSGQLSTQKQAHLIETLNLLPELKQAGAQHKAQRLWDANIRELADWQNES
RIASNTLSHLVAASQQLVTVGLVVTGVYQIYAGNISMGALIAMVMLSGRAASAINQIAIL
LLKYRQTRAAMTAVESILALPQETRAQSLNAGKLGFDGSVALRNASFSYPDQPMPAFSDI
NLSIQPGERVGLFGAAGAGKSSLLSVLAAQYQPSSGQLFYHGLEASQWSQDYLRRHIGWV
GQQPLLSYGTVLDNLLLGLTEVDEQKLARVLVTSGIDKLLDRMGAGLSTQVGEFGRQLSG
GQRQAILLGRALLREPKLLLLDEPTSALDERAENQIIASLKALERDVTLVIASHQPKVLA
MCDRVLIVDKGRIVAEQRPSELQGNKRLKSVSVTRREAKQ
NT seq 2103 nt   +upstreamnt  +downstreamnt
atgagcgctgacttccaccacagccgtgcctttatcagccaatgctgcgccgccatgggg
atgacacctccggcggggcaactggctgagctcatggccgggctgacgcctgagacgctg
gaagagatcctcgggcgttttcagctgggcgcttcgctgcaaaaactgcctccggcggat
atggcgctgcccgccattctttttgtggatggcgccccctggctcgccagacgcagaacc
aaagaaggcgtgctgctggaatcccccgacggtgagcagcgccagcttgcccacaacgag
tggcaaaccacctgcgagggccgcagctggtatttgcaggcccgggaacttgccgactac
cgcgccaccgagcatcagcaaagccgcccgcgccattatctggccgaggccttcgatgag
atgcgccccttccttaaaagctttttgctggcgtcctttgccgccaacctgctggcgctg
gtgacgccgctctttaccatgaacgtgtatgaccgggtggtgcccaatcaggcgaccgat
accctgtgggtgctggcaagtggcgtgtgcgtggccatgctgttcgattttctgctgcgt
caatccagagcgcgactggccgatgtagcgggcaaacacgtagatcaacaggtttccgcc
aagctgttcgaccgcttgctgggcatgcggcttgagcacagacccgcttcggcgggcgcc
tttgccaagcagttgcaggagtttgattcaattcgggatttcctcaccagcgccaccctg
gtcgccctggtcgacctgccctttactgtactgtttctggcgctgatggcctggctcggt
ggctggatggtgatggtgcccgtgcttgccatgctgtgcctgattggcatgagccttatt
ctcgagcggcgcattgctgcggcggtggaaaagtcaggccagctgtctacccaaaagcag
gcgcacctcatcgagaccctgaacctgctgccggaactcaaacaggccggagcccagcac
aaggcccagcggctgtgggatgccaatatccgcgagctggccgactggcagaatgagtcg
cgcatcgcctccaataccctgagccacctggtggcggccagccagcagctggttactgtg
ggcttggtggtcacaggggtgtatcagatttatgcgggcaacatcagcatgggcgccctg
attgccatggtgatgctcagtggccgcgccgcgtccgccattaaccaaattgcaattctg
ctgctcaaataccgtcagacccgcgctgccatgacagccgtagagtccatcctcgccctg
ccccaggagacccgcgcccagagcctgaatgccggaaaactgggattcgatggctcggtg
gcactgagaaacgccagtttcagctaccccgaccaacccatgcctgctttcagcgacatc
aacttaagcattcagccgggtgagcgtgtcggcctgtttggcgccgcaggcgctggcaag
tcgagcctgctgtcggtcctcgccgctcaatatcagccctccagcggccagctgttttat
cacggcctcgaggcttcccagtggtcgcaggactatctgcgccgccatatcggctgggtc
ggccagcagccgctgctgagctacggtactgtgctggataacctgctgctggggctaacc
gaagtggacgagcaaaaacttgcccgggtgctggtgaccagtggtatagacaagcttctc
gatcgcatgggcgccggactttccacccaggtgggggaatttggtcgccaactctccggc
ggtcagcgtcaggcaattttgcttggccgggccctgctgcgtgaacccaaactgctgctg
ctcgatgagcccaccagcgccctggatgaacgggccgagaatcaaattatcgccagcctc
aaggcactggagcgggacgtgaccctggtgattgcctcccaccagcccaaggtgctggcc
atgtgcgaccgggtgctgattgtcgataagggccggattgtggccgagcagcgtccatca
gagctgcaaggtaataaacgtctcaagtcggtaagcgttacccgcagggaggccaagcaa
tga

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