Shewanella khirikhana: STH12_03140
Help
Entry
STH12_03140 CDS
T06711
Symbol
frdA
Name
(GenBank) Fumarate reductase flavoprotein subunit
KO
K00233
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
7.1.1.12
]
Organism
skh
Shewanella khirikhana
Pathway
skh00020
Citrate cycle (TCA cycle)
skh00190
Oxidative phosphorylation
skh00620
Pyruvate metabolism
skh00650
Butanoate metabolism
skh00720
Other carbon fixation pathways
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01120
Microbial metabolism in diverse environments
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
STH12_03140 (frdA)
00620 Pyruvate metabolism
STH12_03140 (frdA)
00650 Butanoate metabolism
STH12_03140 (frdA)
09102 Energy metabolism
00190 Oxidative phosphorylation
STH12_03140 (frdA)
00720 Other carbon fixation pathways
STH12_03140 (frdA)
Enzymes [BR:
skh01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
STH12_03140 (frdA)
7. Translocases
7.1 Catalysing the translocation of protons
7.1.1 Linked to oxidoreductase reactions
7.1.1.12 succinate dehydrogenase (electrogenic, proton-motive force generating)
STH12_03140 (frdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
HI0933_like
FAD_oxidored
NAD_binding_8
Pyr_redox_2
GIDA
DAO
Pyr_redox_3
Motif
Other DBs
NCBI-ProteinID:
AZQ12204
LinkDB
All DBs
Position
complement(3559149..3561188)
Genome browser
AA seq
679 aa
AA seq
DB search
MKLIYTDCLVVGAGLAGLRVAIAAKERGHDTLVLSLIPAKRSHSAAAQGGMQASLGNTVK
GLGDNEDVHFQDTVKGSDWGCDQTVARMFAHCAPKAVRELTHWGVPWTRVTKGPREVVVN
AERITIEEAEAAHGLINARDFGGTKKWRTCYTADGTGHSLLYAVDNKAISLGIPVHERVE
ALAIIHDGERCHGVVARCLITGELRAYIAKSTTIATGGYGRIYEVSTNAIICEGIGQALA
LETGVATLGNMEAVQFHPTAIVPVGILTTEGCRGDGGLLRDKDGYRFMPDYEPEKKELAS
RDVVSRRMTEHMRKGKGVDSPYGPHLWLDITLLGRKHIETNLREVKEICENFLGIDPAEE
WIPVRPTQHYSMGGIRTTPTGESPQLKGLFAVGEAACWDMHGFNRLGGNSLAETVVGGMI
IGKYVADFCDNNDLVLDTGLAQGFVDKVRAEIDGLIDGDGRENAWQLKAAMQKVMMDYVG
IFRNGPELEEAVTQLKALLQRAANLGVTCKKRHANPELVEALRVRRMLKVALTVACGAAA
RTESRGAHAREDFPQRNDKDWLSRTLASWPDANALEPTLSYEALDVMKMELPPGYRGYGA
DNAIAHPDTAKREAEIAELLASLGPDASREARQQALMPFELPASLQPGNERLSDSLNQLP
EPASAETIPSQNLAGDDNS
NT seq
2040 nt
NT seq
+upstream
nt +downstream
nt
gtgaaactcatctacacagactgtctggtggttggcgccgggctggcgggcctgagggtt
gccatcgccgccaaggagcgtggccacgacaccctggtgttgtccctcattccggccaag
cgttcccactcggcggcggcccagggcggcatgcaggcaagccttggcaatacggtcaag
ggccttggcgataacgaagatgtgcattttcaggacacggtaaaaggctccgactggggc
tgcgaccaaacagtggcgcggatgtttgctcactgcgcccccaaggcggtgcgggagctg
acccactggggcgtaccctggacccgggtgaccaagggcccccgcgaagtggtggtaaac
gccgagcgtatcaccatcgaagaagccgaagccgcccatggcctgattaacgcccgcgac
tttggtggcaccaaaaaatggcgcacctgctacaccgccgacggcaccggccactcactg
ctgtatgcggtggacaacaaagccatttccctcggcattcccgtgcatgagcgggtcgaa
gcgctggcgattattcacgatggcgagcgctgccacggcgtggtggctcgctgccttatc
acaggtgagctgcgcgcttatatcgccaagtccaccaccatagccacaggcggctatggc
cggatttatgaagtctccaccaacgccattatttgcgaaggcataggtcaggcgctggcg
ctggaaaccggcgttgctaccctggggaacatggaagcggtgcagtttcaccctaccgcc
attgtgcccgtgggcattcttaccaccgaaggctgccgcggtgacggcggcctcttgcgc
gacaaggacggctaccgctttatgccggactatgagccagaaaagaaagaactcgcttcc
cgcgacgtggtgtcgcggcgcatgaccgagcacatgcgcaagggcaagggcgtcgacagc
ccctacggtccgcacctgtggctcgatatcaccctgcttggccgcaagcacatcgagacc
aacctgcgggaagtgaaagaaatctgtgaaaacttcctcggtatcgatccggctgaagag
tggatcccggtgcggccgacccagcactattccatgggcggcattcgtaccaccccaacc
ggcgaaagcccccagctcaaagggctgtttgccgtgggtgaggccgcttgctgggatatg
cacggctttaaccgcctcggtggcaactcgctggccgaaaccgtggtgggcgggatgatt
atcggtaaatacgtggcggatttttgcgataacaatgatctggtgctggataccggtttg
gcccagggctttgtggacaaggtgcgagccgaaatcgatggcctgattgatggcgatggc
cgtgaaaacgcctggcagctcaaggccgccatgcaaaaggtgatgatggattatgtgggc
attttccgtaatggccccgagcttgaggaggccgtgacccagctgaaggcgctgttgcag
cgcgctgccaacctcggcgtgacctgcaaaaaacgccatgccaaccctgagctggtggag
gccctgcgggtgcgaagaatgctgaaagttgcgctgacggttgcctgcggcgcggcggcc
cgcaccgagagccgtggtgctcacgcccgggaagatttcccccagcgtaacgataaagac
tggctgagccgcaccctggcaagctggcccgatgccaatgctcttgagccgacactgagc
tacgaggcgctggatgtgatgaaaatggagctgccgccgggctaccgcggctacggcgcc
gacaatgccattgctcatcccgacactgccaaacgcgaggccgaaattgccgagctgctt
gcctctctgggcccagatgccagccgcgaagcccgtcaacaggcattgatgccgttcgag
ctgcctgcaagtctgcagcctggtaatgagcgcctcagtgacagcttgaaccagttgcct
gagcctgccagcgccgaaaccatcccatcgcaaaaccttgccggagacgataactcatga
DBGET
integrated database retrieval system
