Shewanella khirikhana: STH12_03217
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Entry
STH12_03217 CDS
T06711
Symbol
lacZ
Name
(GenBank) Beta-galactosidase
KO
K01190
beta-galactosidase [EC:
3.2.1.23
]
Organism
skh
Shewanella khirikhana
Pathway
skh00052
Galactose metabolism
skh00511
Other glycan degradation
skh00600
Sphingolipid metabolism
skh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
STH12_03217 (lacZ)
09103 Lipid metabolism
00600 Sphingolipid metabolism
STH12_03217 (lacZ)
09107 Glycan biosynthesis and metabolism
00511 Other glycan degradation
STH12_03217 (lacZ)
Enzymes [BR:
skh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.23 beta-galactosidase
STH12_03217 (lacZ)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Glyco_hydro_2_C
Bgal_small_N
Glyco_hydro_2_N
LacZ_4
Glyco_hydro_2
Glyco_hydro_2_N2
Motif
Other DBs
NCBI-ProteinID:
AZQ12277
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All DBs
Position
3665059..3668331
Genome browser
AA seq
1090 aa
AA seq
DB search
MPNPYKLKVLLPALLMLAGLPGSAQTAHGASSQPELSFTDREWRDHQVFAINKLPPHATA
FPFENSEMAMNGDERQSANYLDLNGLWRFHFTRSPKGRPAGFTQPEYDDSSWDNIPVPSN
WEVLGYDHPIYLDERYPFDTRWPDAPTDYNPVGSYRKQFELPEAWQGKRVVLHVGAAKSA
MYVWLNGKEVGYSQGAKTPAEFDITPFVTEGRNLLALQILRWSDASYLESQDMLRISGIE
RDVFLYATEPQFIADVDARPSLNAELSEGSLSLKVSLQNEAQGKNLRLGYRLLDGEMNEV
AKGERSLMLQGKQELSFNAGISKPKLWSAEQPNLYTLLLSLKDERGHSLEVNRIELGFRR
IEINQSQLLVNGKAIRIRGVDRHETDPRTGHVVSRERMLQDIRLMKENNINAVRSSHYPN
DPYWLKLTDKYGLYVIDEANIESHPLAIDEKTQIGDTTSWIPAHLERTRRMFERDKNHPS
VIIWSLGNEAGTGRVFKETYRWLKERDGSRPVQYEPAELDDYTDIFAPMYPSIERLEKFA
SANPDRPGIMIEYAHAMGNSVGNLQDYWDVIDKYPALQGGFIWDWVDQSLQYTAADGHKY
WAYGKDFHPELPSDGNFLNNGLVNPDRVPHPHLSEVKKVYQPVRFHRGKDGQFEVENRYD
FNDLSHLGFFYRLSANGETVASGAIATKTNPAKANPKAGQKARLTLPALPKMDDRREYLL
TLEARTLASDGLIQANHLLAWDQFALTSKRPLPTMAAASSTGKLNVSETSEAIIITSPIA
RFEFNPKRGELTGWQYRGRALIESAPEANFYRAPTDNDLGNGMHEWAAPWQQAWQGFGLT
GFKLAEEKGTVSIHSRFHSASLNADYEQHWQLYADGRLSLQNRFIPAANSEQLPKLPRFG
MQWRMTDGFDTLAWYGRGPGESYADRKSGAAIGSYVGPIAEQFERYARPQETGNKTDVRW
MAISGKALGVLALPTDGELLSGSAWPFKASELDFVVAGDGKSASGLVPSTSRHGADIRLS
PGVTWNIDHKQMGVGGDTSWGRHVHGQYSLPPKPYEYGFMLVPFDPILTRPAELYLGDTS
NASNADKVKQ
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgcccaacccttacaaactcaaggtcttattgcccgcgctgctgatgctcgcaggactg
cccggcagtgcccagactgcccacggtgcaagttcacaaccagagctgtcattcaccgat
cgcgaatggcgcgaccaccaggtattcgccatcaataagctgccgccccatgccacggct
tttccatttgaaaacagcgaaatggcaatgaatggcgacgagcgtcaatcggccaactat
ctggatctcaatggcctgtggcgtttccatttcacccgctcccccaagggcagaccggca
gggttcacccagccagaatatgacgacagcagctgggacaacatcccggtaccgtcgaac
tgggaggtgctgggctacgatcacccgatttacctcgatgagcgttatcccttcgatacc
aggtggccggacgcccccaccgactacaacccggtgggctcttaccgtaaacagtttgag
ctgcccgaggcctggcagggcaagcgggtggtgctgcacgtgggcgccgccaagtcggcc
atgtatgtctggctcaacggcaaagaagtgggttatagccagggtgccaagaccccggcc
gagttcgatatcacgccttttgtcactgaaggccgcaatctgctggcgctgcaaatactg
cgttggtccgacgcctcttacctcgagagtcaggacatgctgcgcatttccggcatcgaa
agagacgtcttcctctacgccaccgagccgcaatttattgccgatgtggacgcccgcccc
agcctcaatgccgagctgagcgaaggcagcttaagcctcaaggtgtcgctgcaaaatgaa
gcgcagggcaaaaacctgcgccttggctatcgactgctggatggtgagatgaacgaggtg
gccaaaggtgagcggtcactcatgctgcagggcaagcaggagctgagtttcaatgcaggc
attagcaagccaaagctatggagtgccgagcagccaaatctctataccctgctgctgagc
ctcaaggatgagcgcggccatagcctcgaggtcaaccgcatcgaactgggcttccggcgt
atcgaaatcaaccaaagccagcttttagttaacggcaaggccatccgcatccgcggcgtt
gaccggcacgaaaccgacccgcgcacgggccatgtggtcagccgcgagcgcatgctgcag
gacatccgcctgatgaaggaaaacaacatcaacgcggtgcgaagctcccactaccccaac
gacccctactggctcaaactcaccgacaaatacggcctctatgttatcgatgaagccaat
atcgagagccacccgctggccatcgatgaaaagacccagataggcgacactacgagctgg
atccccgcgcacctcgagcgcacccgccgcatgtttgagcgcgataaaaaccatccgtcg
gtgattatctggagcctgggtaacgaagcaggcacaggccgggtattcaaagaaacctac
cgctggctcaaggagcgcgacggcagccgcccggtgcagtatgaaccggcggagctggac
gactacacggatattttcgcccccatgtacccctccatcgagcggctggaaaagtttgcc
agtgccaaccccgaccggccggggatcatgattgagtacgcccacgccatgggcaactcg
gtgggcaacctgcaggattattgggatgttatcgacaagtacccggcgctgcagggcggc
tttatctgggactgggtggatcaatcactgcaatacaccgccgccgatggccacaaatac
tgggcctacggtaaagacttccatcccgaactgccaagcgacggcaacttcctcaacaat
gggctggtaaaccccgaccgggtgccccaccctcacttaagcgaagtgaagaaggtctat
cagccggtgcgcttccatcgaggcaaagatggtcagtttgaggtggaaaaccgttacgac
ttcaatgacctgtctcatttgggctttttctatcgcctcagcgccaatggcgagacggtg
gcgagcggcgctattgccacaaaaaccaaccccgcaaaagccaatcccaaagccgggcaa
aaggcgcgccttaccctgccagcgctgcccaaaatggacgatagacgtgagtacctgctg
actctggaggccagaaccctcgcctccgatgggcttattcaggcaaatcacctgctggcc
tgggatcagtttgcactcacatcgaagcgccccctgccaaccatggctgcggcctcatcc
actggcaagcttaacgtgagcgagacgagcgaggcgattatcatcacaagccccatcgcc
cgcttcgagtttaatcccaagcgcggcgaactcaccggctggcagtatcgcggccgggcg
cttatcgagtcggcccccgaggccaacttctaccgcgcccccaccgacaacgaccttggc
aacggcatgcacgagtgggccgcgccctggcagcaggcctggcagggttttggcctcact
ggctttaagctggccgaagaaaaaggcacagtcagcatccacagccgcttccactcggcg
agtcttaatgcggactacgagcagcactggcagctctatgccgatggccgtctgtcgctg
caaaaccgctttatcccagcggccaatagcgagcagctgcccaagttgccccgctttggc
atgcagtggcgcatgaccgatggcttcgacaccctggcctggtacggccgcggccccggc
gagagctatgccgatcgcaagtccggcgctgcaatcggcagctatgtcggccctattgcc
gagcagttcgagcgctacgcccggccgcaggaaaccggcaacaagaccgatgtgcgctgg
atggccatttccggcaaggcgcttggcgtgctcgcgctgcccaccgacggtgagcttttg
agcggcagcgcctggccattcaaggcctccgagctcgacttcgtggtggcaggcgatggc
aaatcggcctcgggactggtgccctccaccagccgccacggcgccgatattcgcctcagc
cccggcgtcacctggaacatcgaccacaaacagatgggcgtaggcggcgatacgtcctgg
ggccgccatgtacacggccaatacagcctgccgccaaagccatatgagtacggctttatg
ctggtgccctttgaccccatactcacccgccccgccgagttgtatctgggcgacacctcg
aacgcatccaatgcagataaggtaaaacaatga
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