Shewanella khirikhana: STH12_03410
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Entry
STH12_03410 CDS
T06711
Symbol
rsmD
Name
(GenBank) Ribosomal RNA small subunit methyltransferase D
KO
K08316
16S rRNA (guanine966-N2)-methyltransferase [EC:
2.1.1.171
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_03410 (rsmD)
Enzymes [BR:
skh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.171 16S rRNA (guanine966-N2)-methyltransferase
STH12_03410 (rsmD)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
STH12_03410 (rsmD)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cons_hypoth95
MTS
Methyltransf_37
MethyltransfD12
RsmJ
Methyltransf_31
Methyltransf_25
Methyltransf_15
TRM
Methyltransf_24
N6-adenineMlase
Motif
Other DBs
NCBI-ProteinID:
AZQ12470
UniProt:
A0ABM7DRZ0
LinkDB
All DBs
Position
3869429..3870067
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AA seq
212 aa
AA seq
DB search
MSRNRSSAGRGQGSKPKTSGGSGTGQVRIIGGQWRSRKLPIKDLEGLRPTTDRVRETLFN
WIAPHLPHARVLDCFGGSGALALEALSRYASFAKVFELQREAANQLKTNLQTLKCDSAEV
VNGDTLALLASGTAEGFDIVFIDPPFRKGLAEATLNALKAHDWLKQGALVYLETESELAG
MALPEGFDELKHKLAGQVCYRLLQFNAGEQTP
NT seq
639 nt
NT seq
+upstream
nt +downstream
nt
atgagcagaaatcgttcatctgccggacgcggtcagggctccaagcccaagaccagcggc
ggttcgggcacgggtcaggtgcggatcatcggcggccaatggcgctcgcgcaagctgcca
atcaaggatctggaagggctgcgtcctaccaccgaccgggtacgtgaaaccctgtttaac
tggatagcaccgcatttgccccacgcgcgggtgctggattgcttcggcggcagcggtgcg
ctggcactggaagccctgtcccgttatgccagcttcgccaaggtatttgagctgcagcgt
gaagcggccaatcagcttaagaccaacctgcaaaccttaaagtgcgacagcgccgaggtt
gtcaatggtgacaccctggcgctgctggcctcaggcactgccgaaggcttcgatatcgtg
tttatcgacccgccattcagaaaggggctggcggaagcgaccctcaacgcccttaaggcc
cacgactggctgaaacagggggctctggtatatctggaaaccgaaagtgaactggcaggc
atggcgctgccagaaggctttgatgagcttaaacacaagctcgccggccaggtgtgttac
cgattgctgcaatttaacgcaggagagcaaaccccatga
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