Shewanella khirikhana: STH12_03454
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Entry
STH12_03454 CDS
T06711
Symbol
cirA_7
Name
(GenBank) Colicin I receptor precursor
KO
K16089
outer membrane receptor for ferrienterochelin and colicins
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_03454 (cirA_7)
Transporters [BR:
skh02000
]
Other transporters
Pores ion channels [TC:
1
]
STH12_03454 (cirA_7)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
Motif
Other DBs
NCBI-ProteinID:
AZQ12513
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All DBs
Position
complement(3917248..3919377)
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AA seq
709 aa
AA seq
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MLAVPVASILKIRGDFAFVYRGEAMKPSKLALCCVAAMVPAATWAEQSIFELSIEQLADI
QVSVSSKVSLPLSLSPANISVFNQEQLQTLGVSQLAELADVTSGYSSYSIYGEWVLETRG
QRAGSFENNKHLVLLDGIRLNHARANKAPIENELPLLPMKQVEVLRGPASAIYGQSAFFG
VISLTSDNEGADGLQLDGTYGGDETGRRAMVSGRLSSRLGNSFGVYQAFDKGSEQALVGP
DFSPLQRYYDDQQAHFGYVRHAFAPGNLGQFVVGYIDMQRQSGLGEHWVGDLSVPQNQIQ
WDTRIAYLSWQNTFFDDWQASVRLVNNDSDEAGTAINNTRAQIEAGDQPLFSQYLVEANA
RLLEAELQWRLGPQRSLLMGASLERRRDKGGFFVPDSPFEELAQTDTSAPEWQRQASDSV
EYRGAFFQYHDVFPSLFDVHLTAGLRYDSGAYLQDSFSHWSPRVALVKALNERWTLKALY
SSAFRSPGLKEYLLNDETRNYVGTHAADPAAALAGLSDSLAPETFSSTELDVLYRQSPWM
LKLSGFYNQTDSALDGRPLRFIDNKGDELSKNSFANSAQRFEVYGVEAEFEWRFAADWQL
GGAVNQVWPASGSEAATKDMPKAKLLAFVAHDLSFARAQLGYRWHGDIEGDASAIASLDA
SLHGQWRTLGWHLRFKNLLGRDNFYAFDGEPGNPLPGRTVELGLSYRFD
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgctggccgttccagtggcttctatactcaaaatcaggggtgattttgcctttgtttac
cggggtgaagctatgaagccatccaagttggctctgtgttgcgttgcggccatggtgccc
gctgccacatgggccgaacagtcgatttttgagctgtcgatagagcagctggccgacatt
caggtgtcggtatcctccaaggtgtctttaccgctgagcctgtctcccgccaatatcagc
gtatttaatcaggaacaattacaaacccttggggtgagtcagctggccgaattggcggat
gtgacgtcgggttacagcagctacagcatttacggcgaatgggtgctggaaacccgtggt
cagcgggctggcagttttgagaacaacaaacacctggtgctgctggatgggatacggctg
aaccatgcccgcgccaacaaggcgccgattgaaaacgagttgccattactgccgatgaaa
caggtggaagtgctgcgggggcctgcctcggcgatttatggtcagagtgcattttttgga
gtgattagcctgacctccgacaatgaaggcgctgatggtttgcagctggatggcacctat
ggcggtgatgagacagggcggcgtgccatggtcagcggcaggctatcgagccgcttgggt
aacagttttggggtgtatcaggccttcgataagggcagtgagcaggccttggtggggcca
gacttttcgcctctgcagcgttactatgatgatcagcaggcacactttggttatgtgcgc
cacgcctttgcccccggcaacttgggccagtttgtggtgggttatatcgatatgcagcgc
cagtcgggccttggcgagcactgggtgggtgatttgtcggtgccacaaaaccaaatccag
tgggatacccgcatcgcctatctcagctggcagaacaccttttttgatgactggcaggcc
agtgtacggctggtgaataacgactcggacgaggcgggcacggccattaacaacacccgg
gcgcaaattgaggctggagatcagccgctgttcagccagtatctggtggaggccaacgcc
cgcttgctggaagccgaactgcaatggcggctggggccgcagcgctcgttactgatgggc
gcatcgttggagcggcgccgggataagggcggcttttttgtgcctgactcgccctttgag
gagctggctcaaaccgatacctcagcgccggagtggcaaaggcaggcgtctgacagcgtg
gaatatcgtggggcattttttcagtatcacgatgttttcccgtcgctttttgatgttcat
cttaccgctgggctgcgttacgacagcggcgcttatctgcaagacagtttcagtcactgg
tcaccaagggtggcgctggtgaaggcgctcaacgagcgctggacgctgaaggcgttgtac
agttcggcctttcgctcgccggggttgaaggaatacctgctgaacgatgagacccgcaat
tatgtcggcacccatgccgccgatccggcagcggccctggcgggcctgagcgacagtctg
gcgcccgagacattcagctcaaccgagctggatgtgttgtaccgtcagtcgccctggatg
ctgaaactgagcggcttttacaatcaaaccgacagtgccctcgatggtcggccattgaga
ttcatcgataacaagggggatgagctgagcaaaaacagctttgccaactcagcgcagcgg
tttgaagtctatggcgtggaggccgagtttgagtggcggtttgcagccgattggcaactt
ggtggtgccgtcaatcaagtgtggcctgccagtggttctgaagcggccaccaaagacatg
cccaaggctaagctgctggcctttgtggcccacgacctcagctttgccagggcgcagctg
ggctaccgctggcatggtgatatcgaaggcgacgccagtgccattgccagcctggacgcc
agtttacatgggcagtggcgcacacttggctggcatctgcggtttaaaaatctgctcggc
agagacaatttttacgctttcgatggtgagccgggcaacccgctgccggggcgcaccgtg
gaacttggactcagctatcgctttgactaa
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