Shewanella khirikhana: STH12_03521
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Entry
STH12_03521 CDS
T06711
Symbol
rsmJ_1
Name
(GenBank) Ribosomal RNA small subunit methyltransferase J
KO
K15984
16S rRNA (guanine1516-N2)-methyltransferase [EC:
2.1.1.242
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_03521 (rsmJ_1)
Enzymes [BR:
skh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.242 16S rRNA (guanine1516-N2)-methyltransferase
STH12_03521 (rsmJ_1)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
STH12_03521 (rsmJ_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SAM_MT
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
AZQ12580
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All DBs
Position
3990263..3991009
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AA seq
248 aa
AA seq
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MFAIHIDKDDSRLSDICQRWQLLPTDSADFALLFEDDALTLKKRDEPKLGGISVDFVSGA
VAHRRKFGGGRSQAIAKAVGLKAGANPSVVDGTAGLGRDAFVLASLGCNVLLIERHPVVA
ALLEDGLRRAYLDAEIGPWMAQRMQLVHGSSLDALDNLQHQPDVVYLDPMYPHRDKSALV
KKEMRVFQSLVGADTDADGLLQPALKLAQKRVVVKRPDYAEDLDGIKPSTRIETKKNRFD
VYVKAAMG
NT seq
747 nt
NT seq
+upstream
nt +downstream
nt
gtgtttgcaatccatatcgacaaagacgacagtcgcctgagtgacatttgccagcgttgg
cagctgctgcccacggatagcgccgactttgcgctgctgtttgaagacgatgccttaacc
ttaaaaaagcgggatgaacccaaacttggcgggatctcagtggactttgtctcgggcgcc
gtggcccacagacgcaagtttggcggcggtcgcagtcaggccattgccaaggcggtgggg
ctcaaggccggtgccaatcccagcgtggtggatggtaccgccgggctaggacgggacgcc
tttgtgctggcaagccttggctgcaatgtactcttgattgagcgtcaccctgtggttgct
gccttgctggaagacggcctgcgtcgtgcgtatctcgatgccgaaattggcccttggatg
gcgcagcggatgcagcttgttcatggctccagcctggatgcactggataatctgcaacac
caacccgacgtggtgtatctcgaccccatgtatccccacagagacaaatctgcgttggta
aagaaagagatgcgggtgtttcagtcattggttggtgccgataccgacgccgatgggctg
ctgcaacctgcattgaagctggcgcaaaaacgtgtggtggtgaaacgccccgactacgcc
gaagatctcgatggcatcaaacccagcacccggattgaaaccaaaaaaaaccgcttcgac
gtctatgtcaaagcggccatgggttga
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