Shewanella khirikhana: STH12_03577
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Entry
STH12_03577 CDS
T06711
Symbol
cirA_8
Name
(GenBank) Colicin I receptor precursor
KO
K16092
vitamin B12 transporter
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_03577 (cirA_8)
Transporters [BR:
skh02000
]
Other transporters
Pores ion channels [TC:
1
]
STH12_03577 (cirA_8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
AZQ12636
UniProt:
A0A3S9LAU3
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All DBs
Position
4041950..4043950
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AA seq
666 aa
AA seq
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MKLRLGLSLSLVCLPLLADEQQDMDKLLSMSLSELGNLRVTSATLTEETLLSVPSAMSLY
RREDIQALGVIYLHQLAALVPGFQTQRMDDSGLNATLSARGRHLGASSREVLVLIDGQRI
NDDWTGGSNFQDRLINIENAERIEFIRGPGSAIYGSNALMGVINIVTGGARTLKLGGGSQ
GVARASGQWQFGDQTRNLALFGALEQRDGHNYLLSEPSPDPATPDFVNARDPAELGDLYL
KASFDEFRFSGRYQRRRSHDFYVVGYVAGDTGKANSDSWHTSLGWQHSWANAISLSGQLS
YSHKNIELYAPTQLAPEPIFRPLQSIFGRVEEQEWATQWTLQGPWKQARWLLGWEWRNPT
LTDTSGAIVPHNGEAPTLFDLSAADGRTVQGLFGQLQYPLLDTLQLTLGLRYDNYSDFGG
HTSPRVALVQQLGDQHSLKLMYSEAFRAPSRVETGSRASDVLTANPDLRPEVAKTLELLW
AHQWAAGLFSISLYDTELKDAVLDSFVAQPEPVRTWVNGSQHISGAELEWQYQWLPHWQS
RLALSHIFHPGLELNTEASSLASMSLNYADGPWSAALYATWVSAKKDANEQDYPQDVSTV
EYTRLGSRATLGMHLAWQWRPQLRVTLHGDNLLDAEYLDVAIRPNNAVGVPGPGRSWMLG
LEWTPR
NT seq
2001 nt
NT seq
+upstream
nt +downstream
nt
atgaagcttcgcttgggtctgtccctgtctttagtatgtctgccgctgctggcggatgag
caacaagacatggacaagcttttgtccatgtcattgagtgaacttggaaacctgcgagtt
accagcgccaccctcaccgaagaaaccctgctcagtgtgccctcggccatgagcctgtat
cgccgtgaagacattcaggcgctgggggtgatttatctgcatcaactggcggcgctggtg
cccggctttcaaacccagcgcatggatgacagtggcctcaacgccacgctctcggcccgc
ggccgccaccttggcgcctcatcgcgggaagtgctggttctgattgatggccagcgcatc
aacgacgactggaccggcggcagcaactttcaggatcggctgatcaatatcgaaaacgcc
gagcgcatcgagtttatccgcggccccggcagtgccatctacggcagtaatgccctgatg
ggggtgataaacatagtcacaggcggcgccaggacgctgaaactcggcggcggcagtcag
ggggtagccagggccagcggtcaatggcagtttggcgaccagacccgcaaccttgcgcta
ttcggcgccctcgagcaaagagacggccacaactacctcctcagcgagccctcacccgat
cccgccaccccggatttcgtcaatgcccgcgacccggctgagcttggcgacctttatctc
aaggccagcttcgatgagtttcgcttcagcggccgttaccagcgccgccgcagccatgat
ttttacgtggtcggctatgttgccggtgacacaggcaaagccaattccgacagctggcac
accagccttggctggcaacacagctgggccaacgccataagcctcagcggccagctgtct
tacagccacaagaacatcgaactttatgcccccacccagctggcacccgagcccatcttt
cggccgctgcaaagcatctttggccgggtggaagagcaggagtgggcgacccaatggaca
ctgcagggcccctggaaacaggcacgctggctattgggctgggagtggcgtaatcccacc
ctcacagataccagcggcgccatagtgccccacaatggcgaggcacccacgctgttcgac
ctgtcggctgccgacggccgcaccgtgcaggggctattcggccagctgcaatatccgttg
ctggacacactgcaactcaccctgggtctcagatacgacaactacagcgattttggcggc
cacaccagccccagagtcgcgctggtgcagcagcttggcgaccagcacagcctgaagctg
atgtactcagaggcgtttcgcgctcccagccgggtggaaaccggctcccgtgccagcgac
gtgctgaccgccaatccggatctcagacccgaagtggccaaaacactggaactgctgtgg
gcgcatcaatgggccgcgggactgttcagcatcagcctgtacgacactgagctgaaagat
gcagtgctcgacagctttgtcgcccagcctgagccggtacgcacctgggtgaatggctcc
cagcacatcagcggcgccgagcttgaatggcaatatcaatggctaccgcattggcaaagc
cgactggcgctgagccacatctttcatccggggctggagctcaataccgaagccagcagc
ctggcgtcgatgagcctgaactacgccgacggcccctggtcggccgcgctgtacgccact
tgggtcagcgccaaaaaagatgccaacgaacaggactaccctcaggatgtgagcacggtg
gagtacacccgccttggcagtcgcgccaccctgggcatgcacctggcgtggcagtggcgg
ccgcagctcagggtcaccctgcacggcgataatctgctcgatgccgagtaccttgatgtg
gcgattcgccccaacaatgccgtgggcgtgcccggccccgggcgcagctggatgctgggg
ttggagtggactcccagataa
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