Shewanella khirikhana: STH12_03608
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Entry
STH12_03608 CDS
T06711
Symbol
rlmF
Name
(GenBank) Ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_03608 (rlmF)
Enzymes [BR:
skh01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
STH12_03608 (rlmF)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
STH12_03608 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_25
AlaDh_PNT_C
Methyltransf_11
PrmA
Methyltransf_12
NNMT_PNMT_TEMT
Motif
Other DBs
NCBI-ProteinID:
AZQ12667
LinkDB
All DBs
Position
complement(4075807..4076730)
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AA seq
307 aa
AA seq
DB search
MKPKQTQGKGLHPDNAHRDGYDFGALVASFPPLKAFVRPNAYGNPSIDFARPEAVKALNC
ALLKHHYGIQGWDIPKGFLCPPIPGRVDYLHHLEGLLAQTPAAEGLPVLDIGTGANGIYA
LLAASRFGRNVVATDIAKASLANVAKVLAANPLLNARVSLRHQANPKRIFAGVVTDEERF
AACVCNPPFHASADDAAGGSRKKLAGLAKSRGKQTGSTDKAGAPRLNFGGQDAELWCDGG
ELRFLLRMIEESARRPKLCLWFSSLVSKGENVRPCKRQLQKLGAAEVKVLEMHQAMKITR
VLTWRFD
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atgaaacccaaacaaacccaaggcaaggggcttcaccccgataacgcccaccgtgatggt
tatgactttggcgcgctggtggcaagcttcccgccgctgaaagcctttgtgcgccccaat
gcttatggcaatccctcaatcgactttgcccgccctgaggcggtgaaggcgctaaactgc
gcgctgctcaagcaccactatggcattcagggctgggatattcccaagggctttttatgt
ccgccgataccgggacgggtggattatctgcatcacctggaaggcttgctggcacaaacc
ccggctgctgagggcttgcctgtgctcgatatcggcaccggcgccaatggcatttatgcg
ctgttggcggcgagccgttttggccgcaacgtagtggctaccgatatagccaaggcgtcg
ctggccaatgtggctaaggtgcttgccgccaatccgctgctcaacgcgcgggtgagtttg
cgacatcaggctaaccccaagcgtattttcgccggggtggtgacggatgaagagcgcttt
gccgcttgtgtctgtaatccgccttttcatgccagcgccgacgatgctgcaggtggcagt
cgcaaaaagttggccgggcttgccaaaagccgtggcaagcagactggcagcaccgataag
gccggggcgccgcggctgaatttcggtggccaggatgccgagctttggtgcgatggtggt
gagctgcgtttcttactgcggatgattgaagagagcgccaggcggccgaaattgtgtctc
tggttcagctcattggtgtccaagggggagaatgtgcgcccctgcaagcgccaactgcaa
aagctgggcgccgccgaggtgaaagtattggagatgcaccaggcgatgaagatcacccgg
gtgttgacctggcgcttcgattga
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