Shewanella khirikhana: STH12_03619
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Entry
STH12_03619 CDS
T06711
Symbol
ybdG
Name
(GenBank) Miniconductance mechanosensitive channel YbdG
KO
K16053
miniconductance mechanosensitive channel
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_03619 (ybdG)
Transporters [BR:
skh02000
]
Other transporters
Pores ion channels [TC:
1
]
STH12_03619 (ybdG)
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GFIT
Motif
Pfam:
MS_channel_2nd
MS_channel_3rd
Motif
Other DBs
NCBI-ProteinID:
AZQ12678
UniProt:
A0ABM7DSJ4
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All DBs
Position
complement(4088266..4089444)
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AA seq
392 aa
AA seq
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MIALLGASLIIAVIAYLIVRRGVVKAMNLVIQRSSVTWDDVFMNHKVLEKLSMLVPVMVL
DLLLPIVLAEHKLAANLADRLINVALVVFLIRALYSALDALNDIADAREISRRLPIKSVV
QLIKLFLFFVGVIIGISVLADQSPVIFLSGLGVATGLVMLVFKDTILGFVAGIQLAANRM
VSKGDWIQMDKYGADGAVEEVSLTTVKVRNWDNTLTMIPAYALVSDAFRNWRGMSESGGR
RIKRALNIDINSIRFLTEDDRARLERINLLKKYLPEKVTEVTEANADVADMDVMVNGRRL
TNVGTFRAYLTEYLRHHDKIHKGMTLMVRQLAPTTEGLPIELYIFTNDTRWVVYEGIQAD
IFDHIFAILPEFDLRAFQNPTGQDIRSIRANS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgattgccttgttgggggcatcgctcatcattgccgttatcgcctatctgatagtccgc
cgcggggtggtaaaggcgatgaacctggtgatccagcgctccagcgtgacctgggatgat
gtgttcatgaatcataaggtgctggaaaagctctccatgctggtgcctgtgatggtgctg
gatttgctgttgcctattgtgctggccgaacacaagttggcggcgaatctagctgatcgg
ctgatcaatgtggctctggtggtatttcttatccgtgccctctattcggccctcgatgcc
ctgaatgacattgctgatgcccgcgagataagccgccggttgccaatcaagagcgtggta
cagctgataaaactgttcctgttctttgtgggcgtcatcataggtatctcggtgctggca
gatcagtctccggttatctttctctccggcttgggtgtggctaccggtttggtgatgttg
gtgttcaaggacacgattcttggctttgtcgccggtattcagcttgctgccaaccgcatg
gtgagcaagggcgactggatccagatggataaatacggtgccgatggtgccgtggaagaa
gtgtcgctgaccacggtgaaggtgcgtaactgggataacaccctgaccatgatcccagct
tatgcgctggtgtcagatgcgtttcgtaactggcgtggtatgtctgagtctggtggccgt
cgcattaagcgggcgctgaacatcgatatcaacagcattcgctttctcacagaagacgac
agagcgcggctggagcggattaatctgctgaagaagtatttacctgagaaggtaactgaa
gtgaccgaagccaatgcggacgtggccgatatggacgtgatggtcaatggtcggcgccta
accaacgtgggcaccttcagggcctatttaaccgagtatttgcgccaccacgataaaatt
cacaagggtatgaccctgatggtgcgccagcttgcgcccaccaccgaaggcttgcccatc
gaactttatatctttaccaacgatacgcgctgggtggtgtatgaaggtattcaggccgat
attttcgaccacatcttcgccatcttgccagagttcgatttacgggcgttccaaaacccg
actggccaggatattcgcagtattcgcgctaattcttaa
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