Shewanella khirikhana: STH12_03684
Help
Entry
STH12_03684 CDS
T06711
Symbol
fadB
Name
(GenBank) Fatty acid oxidation complex subunit alpha
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
skh
Shewanella khirikhana
Pathway
skh00071
Fatty acid degradation
skh00280
Valine, leucine and isoleucine degradation
skh00310
Lysine degradation
skh00362
Benzoate degradation
skh00380
Tryptophan metabolism
skh00410
beta-Alanine metabolism
skh00640
Propanoate metabolism
skh00650
Butanoate metabolism
skh00907
Pinene, camphor and geraniol degradation
skh00930
Caprolactam degradation
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
skh01120
Microbial metabolism in diverse environments
skh01200
Carbon metabolism
skh01212
Fatty acid metabolism
Module
skh_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
STH12_03684 (fadB)
00650 Butanoate metabolism
STH12_03684 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
STH12_03684 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
STH12_03684 (fadB)
00310 Lysine degradation
STH12_03684 (fadB)
00380 Tryptophan metabolism
STH12_03684 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
STH12_03684 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
STH12_03684 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
STH12_03684 (fadB)
00930 Caprolactam degradation
STH12_03684 (fadB)
Enzymes [BR:
skh01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
STH12_03684 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
STH12_03684 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
STH12_03684 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
STH12_03684 (fadB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AZQ12739
UniProt:
A0ABN5TZ74
LinkDB
All DBs
Position
complement(4164203..4166353)
Genome browser
AA seq
716 aa
AA seq
DB search
MIYQSPTIQVELTGDKIARLCFNAPGSVNKFDRETLAALDAALDAIKASDAKAALLTSGK
DTFIVGADITEFLALFAEEDAKLQAWLEQANVVFNKLEDLPFPTASAIKGFALGGGCETI
LATDFRIADTTAKIGLPETKLGIIPGFGGTVRLPRIIGADNALEWITTGKDQRPEDALKV
GAIDAVTAPDALEAAATQMLKDAIDGKLDWQARRARKQSPLTLPKLEAMMSFTTAKGMVY
AVAGKHYPAPMAAVSVVEKAAGMSRADALQVEHQAFIQLAKTDVATALIGIFLNDQVVKG
KAKKAGKLAKNVNQAAVLGAGIMGGGIAYQSASKGTPIVMKDINQAALDLGLNEAAKLLT
AQVSRGRSTPEKMAKVLNNITPALDYAPIKDAAVVVEAVVENPKVKSAVLAEVEGLVADD
AIIASNTSTISIDFLAKSLKNPARFCGMHFFNPVHKMPLVEVIRGKDTSEETVATVVAYA
SKMGKTPIVVNDCPGFFVNRVLFPYFAGFNGLLADGGDFAAIDKVMEKQFGWPMGPAYLL
DVVGLDTGHHAQAVMAEGFPDRMGKSGKDAIDVMYEAGRLGQKNGKGFYQYSIDKRGKPK
KDVDPASYAMLAEAFGEQKAFDADEIIARTMIPMIIETVRCLEEGIIASPAEADMGLVYG
LGFPPFRGGVFRYLDTMGVANFVALADKYAHLGGLYQVTDAMRALASSNGSYYPKA
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
atgatctaccaaagccctacaatccaggtcgaattgaccggtgacaagattgcccggctg
tgttttaacgcacccggctcggtcaacaagttcgatcgtgaaaccctcgccgccctcgac
gctgctcttgacgccatcaaggcctccgacgccaaagctgccctgctgacctcaggcaaa
gatacctttatcgttggcgccgacattaccgaattcctcgccctgtttgccgaagaagac
gccaagctgcaagcatggctcgagcaggccaatgtggtgttcaacaagcttgaagacttg
cctttccccactgcctcagccatcaagggctttgccctgggcggcggctgtgaaaccatt
ctggccaccgacttccgtatcgcagataccaccgccaagattggtctgcccgagaccaaa
ctcggtatcatcccaggctttggcggtacagtgcgcctgcctcgcatcataggtgccgat
aacgcgctggaatggatcaccaccggcaaagatcagcgtcctgaagatgccctgaaagtt
ggcgccatcgacgcagtcacagcgccggatgctctggaagccgcagcaacccaaatgctg
aaagatgccatcgatggcaagctcgactggcaagcgcgccgcgcccgtaagcagtcgccg
ctgacgctgccgaagctcgaagccatgatgtcattcaccaccgccaaaggcatggtctac
gccgtggccggtaagcattaccctgcgccaatggccgccgtgagtgtggttgaaaaggct
gccggcatgagccgcgccgacgcgctgcaggttgaacatcaagcctttattcaattggcc
aaaaccgatgtagccaccgcgctgattggtatcttccttaacgatcaggttgtaaaaggc
aaagccaagaaggccggcaaactcgccaaaaacgtgaaccaggctgccgtactcggcgcc
ggtatcatgggtggcggtatcgcctatcaaagtgccagcaagggcaccccaattgtgatg
aaagacatcaaccaggccgctctggatctgggtctgaacgaagccgccaagctgcttacc
gctcaggtttcccgtggtcgctccacgccggagaaaatggccaaggtgctgaataacatc
acccctgcgctggactacgcccccattaaagatgccgccgtggtagttgaagccgtggtg
gaaaatccaaaagtgaaatctgcggtgctggccgaggtagaaggtctggtggctgacgac
gccatcatcgcctccaacacctcgaccatctccatcgatttcctggccaagagcctgaag
aaccctgcgcgcttctgcggcatgcacttctttaatccagtacacaagatgccactggtg
gaagtgatccgcggtaaagacaccagcgaagaaaccgttgccactgttgttgcttacgcc
agcaagatgggcaagaccccaatcgtggtgaacgactgcccgggcttcttcgtaaaccgc
gtgctgttcccctactttgcaggctttaatggtctgctggccgacggtggcgacttcgca
gccatcgataaggtgatggaaaagcaattcggctggccaatgggcccggcttacctgctc
gacgttgtgggcctggacacaggtcaccacgctcaggcggtgatggccgaaggcttccct
gatcgcatgggcaagtccggcaaagatgccatcgacgtcatgtacgaagccggtcgcctg
ggccagaaaaatggcaagggcttctatcagtacagcatcgataagcgcggcaagccgaag
aaggatgtggacccggcttcctacgctatgctggccgaagcctttggcgagcagaaagcc
tttgatgccgatgagatcatcgcccgcaccatgatccccatgatcatcgaaaccgttcgt
tgtctcgaagaaggtattatcgccagcccggccgaagccgatatgggtctggtatatggc
cttggcttccctccattccgtggcggcgtgttccgctatctggataccatgggcgtagcc
aacttcgtggcactggccgataaatatgcccatctgggcggcctgtatcaggtcacagac
gccatgcgcgctctcgcgagcagcaatggcagctactatccaaaggcctga
DBGET
integrated database retrieval system
