Shewanella khirikhana: STH12_03699
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Entry
STH12_03699 CDS
T06711
Name
(GenBank) Microbial collagenase precursor
KO
K01387
microbial collagenase [EC:
3.4.24.3
]
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
skh01002
]
STH12_03699
09183 Protein families: signaling and cellular processes
02042 Bacterial toxins [BR:
skh02042
]
STH12_03699
Enzymes [BR:
skh01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.24 Metalloendopeptidases
3.4.24.3 microbial collagenase
STH12_03699
Peptidases and inhibitors [BR:
skh01002
]
Metallo peptidases
Family M9
STH12_03699
Bacterial toxins [BR:
skh02042
]
Toxins that damage the extracellular matrix
Hyaluronidases/Collagenases
STH12_03699
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M9
DUF5358
Motif
Other DBs
NCBI-ProteinID:
AZQ12754
UniProt:
A0A3Q9EA39
LinkDB
All DBs
Position
complement(4180377..4182128)
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AA seq
583 aa
AA seq
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MNSKSLALCLMLAIAGCAQTPTSNIALTDTLTPRLANIEHTLTADDELYSMANFNLALAL
LQRPETDHEKLLVYLRAYSYFGDMKVIDAKQASRLAEILAQIAQAAPDSSREQIAVVGYR
FFADKDRGAEIAPFTELLASQLKQLAAQPASLERDYALWETLRAYGFLLFESRKHPDSSL
AKTMLASDASTVLLNFAGSDAAISGADDWPRMNAYWALALYRLALPAGDDGEATPAERKL
DEEVKNIAAADAKSRGEAAKTAYTLGYHVNRFAGKEACEQDALCVIPELTQVLPQRHECS
DSLYILSQDLTEAEFAESCTRLISQEDSFHALLQTARVATANDFNQALQVVAFKNWSQYN
AYGQLLFDIGTDNGGMYIEGTPSKPGNQASFFAFRQWWIAPEFAIWNLNHEYVHYLDGRF
VKYGGFGHFPGKMVWWAEGLAEYVSKSNDNPDAIKLAREKRAEAPTLADIFATEYKDGLD
RTYRWSYLAIRYLAEQRPAALVELSRLLKTDYFEGYDALLSQVASEEQSGFETWLDGQIA
QAEAQPKDAPTLPRKLNRYAYRDYLTPAHLQLPKDKTGVHFHF
NT seq
1752 nt
NT seq
+upstream
nt +downstream
nt
gtgaactccaaatccctcgccctctgcctgatgcttgccatagcaggctgcgctcaaacg
cccacatcaaacattgcattgaccgatacgcttacgcccaggcttgccaacattgagcat
acgctgacagccgatgatgaactctacagcatggccaacttcaatctggcgctggcactg
ctgcaaaggcccgaaaccgatcatgaaaagctgctggtctaccttcgtgcctacagttat
ttcggtgacatgaaggtaatagatgcaaaacaagcctcacgccttgccgagattctggcg
caaattgcgcaggccgctcctgacagcagccgcgagcaaatcgccgtagtgggctatcgc
ttctttgccgataaagaccgcggcgctgagattgcaccttttactgaactgctggcgtcg
cagctgaagcaattggcagcacaacctgcatcactcgagcgggactatgccctgtgggaa
accctgagagcttatggctttttactgtttgaaagccgcaagcacccggatagcagccta
gccaaaactatgctcgcatcagatgcaagcacagtactgctgaactttgcaggcagcgat
gccgccatcagtggcgcggatgactggccgcgaatgaatgcttactgggcgctggcactc
tatcgtctggcgctgccagcgggcgacgatggtgaagccacgcctgcggagcgcaaactg
gatgaagaggtgaaaaacattgccgcagccgatgccaaaagtcgcggcgaagcggccaaa
acggcctataccctgggttaccacgtcaaccgctttgccggcaaagaagcctgcgagcag
gatgcgctttgcgtgatcccagagctgacgcaggtactgccccagcgccatgagtgttca
gacagcctgtatatcctgtctcaggatttgaccgaggcggagtttgccgaaagctgcacc
cgactgatttctcaggaagacagtttccatgccttgctgcaaaccgcccgggtagcgacc
gccaacgacttcaatcaggcgctgcaggtcgtcgcttttaaaaactggagccaatacaac
gcttacggacaactgctgtttgatataggcacagataacggcggcatgtatatcgaaggc
acaccgtccaaacccggcaatcaggccagctttttcgccttccgccaatggtggattgca
cccgaattcgctatctggaatctgaaccacgaatacgtgcattacctcgatggccgtttt
gtaaaatacggcggttttggccacttcccgggcaaaatggtgtggtgggcagaggggctg
gcggaatatgtctccaaaagcaatgacaaccccgacgccatcaagctggcgcgggaaaag
cgcgctgaagcgcccaccctggcggatatcttcgcaaccgaatacaaagatggattggac
aggacctaccgctggagttatctcgccatccgctatctggcagagcagcgtccagccgcg
ttagtggagttgtcgcgcctgttaaagaccgattattttgaaggctatgatgccttgcta
agccaagtggccagcgaagagcaaagcggttttgaaacctggttggatgggcaaattgcc
caagctgaagcccagccaaaagatgcaccaacgctgccccgcaagcttaaccgctatgcc
taccgcgactacttaacgccagcgcatttgcaactgcccaaggataaaaccggcgtgcat
ttccatttctaa
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