Shewanella khirikhana: STH12_03750
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Entry
STH12_03750 CDS
T06711
Symbol
yvoA
Name
(GenBank) HTH-type transcriptional repressor YvoA
KO
K05836
GntR family transcriptional regulator, histidine utilization repressor
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_03750 (yvoA)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
GntR family
STH12_03750 (yvoA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTRA
GntR
HTH_DeoR
HTH_11
HTH_20
MarR
HTH_Crp_2
HTH_36
RP-C
HTH_IclR
DUF7342
DnaD_N
SoFic-like_C
HTH_24
Rrf2
Replic_Relax
Arm-DNA-bind_5
HTH_Tnp_4
HTH_7
Motif
Other DBs
NCBI-ProteinID:
AZQ12802
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Position
4236174..4236878
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AA seq
234 aa
AA seq
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MATAKFAEIKEYIRRHIESGEWEENTRVPSENQLAEQFDCSRMTARRALTELVEAGVLER
SQGLGTFVASLKSQSSILSIRNIADEIKGRGHGYSVQVLELEPMKAIAPIAIALGLEEGS
EVFYSLLVHCEQGLPLQLEERFVNPELIPHYLEQDFSSQTPHEYLSQVAPLTEARHTIEA
IMPKEQVRSRLNMAEGEPCLQIIRRTWSRQGVVSFARLIHPGNRFRLGGHLTFK
NT seq
705 nt
NT seq
+upstream
nt +downstream
nt
atggccacagccaagtttgccgaaatcaaagaatatatacggcgtcatatcgagtccggt
gagtgggaagaaaacacccgggtgccgtcggaaaaccaactggcggaacagtttgattgc
agccgcatgaccgcccgccgagccctgaccgaactggttgaggccggggtgttggagcgc
tctcaggggctgggcacctttgtggcgtcgctcaaatcgcagtcaagcatcctgtccatt
cgtaacattgccgatgagattaaaggccgtggccatggctacagtgtgcaggtgctggag
ctggagccgatgaaagccattgcacccatcgccattgcgctggggttggaagaaggcagc
gaggtgttttactcactgctggtgcactgcgagcaggggttgccgctgcaactggaggag
cgctttgtgaatccagaactcattccgcactatctggagcaggatttcagcagccagaca
ccccacgaatatctgtcgcaggtggcgccgctgaccgaggcgcgccacaccatagaggct
attatgcccaaagagcaggtgcgcagtcgccttaatatggccgaaggcgagccctgcctg
cagatcatccgccgtacctggtcacgtcagggggtggtgagctttgcccggcttatccac
cccggcaaccgtttccgcctcggcggtcatctcacgttcaagtag
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