Shewanella khirikhana: STH12_03830
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Entry
STH12_03830 CDS
T06711
Symbol
yicI
Name
(GenBank) Alpha-xylosidase
KO
K01187
alpha-glucosidase [EC:
3.2.1.20
]
Organism
skh
Shewanella khirikhana
Pathway
skh00052
Galactose metabolism
skh00500
Starch and sucrose metabolism
skh01100
Metabolic pathways
skh01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00052 Galactose metabolism
STH12_03830 (yicI)
00500 Starch and sucrose metabolism
STH12_03830 (yicI)
Enzymes [BR:
skh01000
]
3. Hydrolases
3.2 Glycosylases
3.2.1 Glycosidases, i.e. enzymes that hydrolyse O- and S-glycosyl compounds
3.2.1.20 alpha-glucosidase
STH12_03830 (yicI)
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
NPCBM
Glyco_hydro_31_2nd
Glyco_hydro_31_3rd
DUF5110
Gal_mutarotas_2
F5_F8_type_C
Motif
Other DBs
NCBI-ProteinID:
AZQ12882
LinkDB
All DBs
Position
4327484..4330810
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AA seq
1108 aa
AA seq
DB search
MATLTPYASFGLSSIKPRQLALAVALVLAPIGTTAIAAPVGKLVNLNAEGSSVSINTDSG
ALVQLDVLKPTLIRIQAGASGKLVGEGSKAASIVIKNDYPAVPFTLSDEGDYRLLNTGAL
ALRIYEAPLRFALYQADNQTLITEELQSLELGEASTVQTLSTDADERFFGGGQQNGAFEF
KGKSLEISYSGGWEEGDRPSPAPFYLSSKGYGVLRNTWANGSYDFRSSDALRLGHDEGRF
DAFFFAPGSIQQVLADYTELTGRARLIPRWAFEYGDADCYNDGDNVKKPGTVPDGWSDGP
TGTTPDVIDSVAKKYREHDMPGGWILPNDGYGCGYTDLPKVVEGLAKYGFRTGLWTEDGV
DKIAWEVGKAGTRAQKLDVAWTGEGYQHALDANKAAADGILDNSDSRPFLWTVMGWAGMQ
RYAVTWTGDQSGSWDYIRWHIPTLIGSGLSGQAYATGDVDAIFGGSPETFTRDLQWKAFT
PVLMGMSGWSKAARKHPWWFDEPYRSINRDYLKLKMRLTPYMYTTAFETEQSGAPIVRGL
MWDYSDDPTANTEAHKYQFLLGKDMLVAPVYRSQTASKGWREDVYLPKGQWIDYWDGRVV
DAPEGGASIDYQVDLNTIPVFVRAGAIIPMYPEALYDGHKPKDVLTLDIYPYGESEYLMY
EDDGNTRRYQQGEFARQRFAVKAHEGKAGDIEVSIGAAEGKFDGQDEARVYELWLHTRVK
PDAVLLDGKKLKALKDEAALAKAKSGWAYSDTRYGTVLVKTEKVSVREALEFKLEIDESQ
QLAATAGYAQAPELGNEIPADSLLVLARPAEEAGHPLENAFDNNPDTWFRTKRDQAQKTG
AHEFTLALGERRFIAGFEIAPRNDKHWEYGQVADYEVYLGENNGEWGEPVAKGRLDKSQT
MQKVEFVPKPGSLLRFRVLSTQNELGNDPMVTAAKSQGGAFNALLPKSVTPITISEFKVL
TAPEPKAPRTQQFLAELTPQKLDKSAGSRVALNTAIGGKPMSMNGLKFSKGLGMAANSRV
DYRLEGNWQLLRADLGIDDSCKTKGGMHFKIFGDGKLMYDSGLIEAPAVVKPELDIRGVE
TLSLQTESTAKGVCGNWANASLIGWPKG
NT seq
3327 nt
NT seq
+upstream
nt +downstream
nt
atggcaaccctcactccctacgcctctttcgggctttcatcgattaaacccaggcaactg
gcattagccgtggctttggtactggcacccataggcactaccgccattgccgcccccgtg
ggcaagctggttaacctgaatgccgaaggcagcagtgtcagcatcaataccgacagcggc
gccctggtgcagcttgatgtgctcaagcccacacttattcgcattcaggcgggcgccagt
ggcaagcttgtcggcgaaggcagcaaagccgcatccatagtaattaaaaacgattacccc
gcggtgcccttcaccttaagtgatgaaggcgactatcggctgctgaatacaggcgcgctg
gcactgcgaatttacgaagcgccactgcgctttgctctatatcaggccgataatcaaacc
cttatcaccgaggagctgcaaagcctggagcttggggaggccagcactgtgcagaccctg
agcacagatgccgacgagcgcttcttcggtggcggccagcaaaacggcgccttcgagttc
aagggcaagagcctggagatctcatactccggcggctgggaggagggcgacagacccagc
ccggcgcctttttatctgtcgagtaagggttatggcgtgctgcgcaacacctgggccaac
ggcagctatgacttcagaagcagcgacgccctgcgcctcggtcacgacgagggtcgtttc
gatgccttcttctttgcccccggcagcattcagcaggtgctggccgactacacagagcta
accggccgcgccaggctcatcccgcgctgggcctttgaatacggcgacgccgactgctac
aacgatggcgacaacgttaaaaagcccggcaccgtgcccgatggctggagcgatggcccc
acgggtaccacgccggatgtgattgactctgttgccaaaaaatatcgcgaacacgatatg
cccggcggctggatattaccgaacgacggttatggctgcggctataccgacctgcccaag
gtggttgaagggcttgccaaatacggcttcagaaccggcctttggaccgaagatggggta
gataaaatcgcctgggaagtgggtaaggccggcacccgggcgcaaaagctcgatgtggcc
tggaccggtgagggttatcagcatgcgctggatgccaacaaagccgccgccgatggcatt
ctggataattcagactcgcgccccttcctctggaccgtgatgggctgggccggcatgcag
cgctacgcagtaacctggaccggcgatcagtccggcagctgggactatatccgctggcat
attcccaccctcattggctcgggtctgtccggtcaggcttatgccaccggcgatgtggac
gccatttttggtggcagcccggaaacctttacccgtgatttgcagtggaaggcctttacc
ccggtgctgatgggtatgtccggttggtcaaaagcggcgcgcaagcacccctggtggttc
gatgagccctatcgcagcatcaaccgcgactatttgaagctgaaaatgcgcctcaccccc
tacatgtacaccacggcatttgaaaccgagcaaagcggcgcgcccatagtacgcggcctg
atgtgggactacagcgacgaccccaccgccaacacagaggcgcacaagtatcagtttttg
ctgggtaaagacatgctggtggcccccgtgtatcgctcacaaaccgccagcaaaggttgg
cgcgaagacgtgtacctgcccaaaggccaatggattgactactgggacggccgggtggtg
gatgcccctgaaggcggcgccagcatcgattatcaggtggatttgaacaccatcccggtg
tttgtccgtgccggtgccattatccccatgtacccagaggcgctgtacgatgggcataaa
cccaaggatgtgctgaccctggatatttacccttatggcgagtctgaatacctgatgtat
gaagacgatggcaacacccgtcgttatcagcagggcgagtttgcccgccagcgctttgcg
gtgaaggcgcacgagggcaaggctggtgacattgaagtcagcattggcgcggcagagggc
aagttcgatggccaggatgaagcgcgagtctatgagctgtggctgcatacccgcgtaaaa
ccagatgctgtgctgcttgatggtaaaaagcttaaagccctcaaggatgaagctgccctc
gccaaggccaagagtggctgggcttattcggataccaggtacggcactgtgctggtgaaa
accgaaaaagtctcggtgcgtgaggcgctggagttcaagctggaaattgatgaatcacag
cagcttgctgccaccgcaggttacgcacaggcgcccgagcttggcaatgaaatccctgcc
gacagcctgctggtgcttgcccgtcccgccgaagaagcagggcatccgctggaaaatgcc
ttcgataacaatccggatacctggttcagaaccaagcgggatcaggcacaaaagactgga
gcccacgagtttaccctggcattgggcgagcgccgctttattgccgggtttgaaatcgcg
ccccgtaacgacaagcactgggagtatggtcaggtggccgactacgaggtttacctcggt
gaaaacaatggcgagtggggcgagccggtggccaagggcaggctggataaatcccaaacc
atgcagaaggtggagtttgtgcccaagcccggcagcctgctgcgtttcagggtactgagc
acccagaatgagcttggcaacgaccccatggtgacggcggccaagagtcagggcggcgcc
ttcaatgcgctgctgccaaagagcgtcacgccaatcaccatcagcgagttcaaggtactg
accgcgcccgagcccaaagcgcccagaacccagcagttcctcgccgaactcacgccgcaa
aagctggataagtccgctggcagccgtgtggcgttaaacactgctatcggtggcaaaccc
atgagcatgaacggccttaagttcagcaaggggctggggatggctgccaacagtagggtc
gactatcgtctcgaaggtaactggcagctgctgcgggctgaccttggtatcgacgacagc
tgcaaaaccaagggtggcatgcactttaagatattcggtgatggcaagctgatgtacgac
tcgggcctgattgaggcgccggcggtggtcaagccagaattggatatccgcggcgttgaa
accctgagcctgcaaaccgaaagtacagccaagggtgtctgcggcaactgggccaatgcc
tcactcatcggctggcccaagggttaa
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