Shewanella khirikhana: STH12_03898
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Entry
STH12_03898 CDS
T06711
Symbol
tufA_1
Name
(GenBank) Elongation factor Tu
KO
K02358
elongation factor Tu
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
skh03012
]
STH12_03898 (tufA_1)
03029 Mitochondrial biogenesis [BR:
skh03029
]
STH12_03898 (tufA_1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
skh04147
]
STH12_03898 (tufA_1)
Translation factors [BR:
skh03012
]
Eukaryotic type
Elongation factors
STH12_03898 (tufA_1)
Prokaryotic type
STH12_03898 (tufA_1)
Mitochondrial biogenesis [BR:
skh03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial translation factors
STH12_03898 (tufA_1)
Exosome [BR:
skh04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
STH12_03898 (tufA_1)
Exosomal proteins of breast cancer cells
STH12_03898 (tufA_1)
Exosomal proteins of colorectal cancer cells
STH12_03898 (tufA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
cobW
Lsm_C
Motif
Other DBs
NCBI-ProteinID:
AZQ12940
LinkDB
All DBs
Position
4392757..4393941
Genome browser
AA seq
394 aa
AA seq
DB search
MAKAKFERNKPHVNVGTIGHVDHGKTTLTAAISHVLTKTFGGEARDFSQIDNAPEERERG
ITINTSHIEYDTATRHYAHVDCPGHADYVKNMITGAAQMDGAILVVAATDGPMPQTREHI
LLSRQVGVPFIIVFMNKCDMVDDEELLELVEMEVRELLSEYDFPGDDLPVIQGSALKALE
GDPAWESKILELAEALDTYIPEPERAIDKPFLMPIEDVFSISGRGTVVTGRVERGIVKVG
EEVEIVGIKDTTKTTCTGVEMFRKLLDEGRAGENCGILLRGTKRDEVERGQVLSKPGTIK
PHTKFESEVYVLSKEEGGRHTPFFKGYRPQFYFRTTDVTGTIELPEGVEMVMPGDNIKMV
VTLICPIAMDEGLRFAIREGGRTVGAGVVAKIHE
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggctaaagctaaatttgaacgtaacaagccccacgtaaacgtgggtaccatcggtcac
gttgaccatggtaaaaccactctgactgctgctatctctcacgtgctgaccaagactttc
ggcggtgaggctcgcgacttttctcagatcgataacgctccagaagagcgtgagcgcggt
attaccatcaatacctctcacatcgagtacgatactgcaactcgtcactacgctcacgtt
gactgcccaggtcacgctgactacgtgaaaaacatgatcaccggtgctgcccagatggac
ggcgctatcctggtagtagctgcgactgacggcccaatgccacagactcgtgagcacatc
ctgctgtctcgtcaggtaggtgtacctttcatcatcgtgttcatgaacaagtgtgacatg
gtagatgacgaagagctgctggaactggtagagatggaagttcgtgaactgctgtctgaa
tacgacttcccaggtgatgacctgccagtaattcagggttctgctctgaaagcactggaa
ggtgacccagcttgggaatctaagatccttgagctggctgaagccctagatacttacatc
cctgagccagagcgtgctatcgacaagccgttcctgatgccaatcgaagacgtattctca
atctctggccgtggtactgtagtaaccggtcgtgtagagcgcggtatcgttaaagttggt
gaagaagtagaaatcgttggtatcaaagataccaccaagactacttgtactggcgtagaa
atgttccgtaagctgctggacgaaggtcgtgccggtgagaactgcggtatcctgctgcgt
ggtaccaagcgtgatgaagttgagcgtggtcaggttctgtccaagccaggcaccatcaag
ccacacaccaagttcgaatcagaagtatacgtactgtctaaagaagaaggtggtcgtcac
actccattcttcaaaggctaccgtccacagttctacttccgtacaactgacgtgaccggt
accatcgaactgccagaaggcgtagagatggtaatgccaggcgacaacatcaagatggtt
gtcaccctgatttgcccaatcgcgatggacgaaggcctgcgcttcgctatccgtgaaggc
ggccgcactgtaggtgctggtgtagtagccaagatccacgagtaa
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