Shewanella khirikhana: STH12_03935
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Entry
STH12_03935 CDS
T06711
Symbol
rpsD
Name
(GenBank) 30S ribosomal protein S4
KO
K02986
small subunit ribosomal protein S4
Organism
skh
Shewanella khirikhana
Pathway
skh03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
STH12_03935 (rpsD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
skh03011
]
STH12_03935 (rpsD)
Ribosome [BR:
skh03011
]
Ribosomal proteins
Mitochondria/ Chloroplast
Small subunit
STH12_03935 (rpsD)
Bacteria
STH12_03935 (rpsD)
Archaea
STH12_03935 (rpsD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S4
S4
E1_dh
S4_2
Gp_dh_C
TyrRSs_C
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AZQ12977
LinkDB
All DBs
Position
4422584..4423204
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AA seq
206 aa
AA seq
DB search
MARYLGPKLKLSRREGTDLFLKSGVRAIDSKCKLETAPGQHGARKPRLSEYGTQLREKQK
VRRIYGVLEKQFRNYYKEAARLKGNTGENLLQLLETRLDNVVYRMGFGSTRAEARQLVSH
KSVMVNGRVVNIPSFKVSANDVVSIREKSRTQARIKAALEVAAQREKPTWVEVDAAKMEG
AFKRLPERSDLSADINEQLIVELYSK
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
atggcaagatacttgggtcccaagctcaagctcagccgccgggaaggtactgacctcttc
ctgaaaagcggtgtgagagcaattgattcgaagtgtaagctggaaaccgctccaggccag
cacggtgcgcgtaagccacgtctgtctgaatacggtactcagctgcgcgagaagcagaaa
gttcgtcgtatttacggtgtactggaaaagcagttccgtaactactataaggaagctgca
cgtctgaaaggcaacaccggtgaaaacctgttgcaacttttggaaacccgcctggataac
gtagtttatcgtatgggctttggttcaactcgtgccgaagcacgtcagctggttagccat
aagtctgttatggtaaacggtcgtgttgttaacatcccttcattcaaagtgtctgcgaat
gatgtagtaagcatccgtgagaagtcacgcactcaagcccgtatcaaagcggctttggaa
gtggctgcccagcgtgagaagcctacttgggttgaagtagacgccgctaagatggaaggt
gctttcaagcgtctgccagagcgtagcgatttgtctgcggatattaacgaacagctgatc
gtcgagctttactctaagtaa
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