Shewanella khirikhana: STH12_03946
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Entry
STH12_03946 CDS
T06711
Symbol
ccmF_1
Name
(GenBank) Cytochrome c-type biogenesis protein CcmF
KO
K02198
cytochrome c-type biogenesis protein CcmF
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
skh02000
]
STH12_03946 (ccmF_1)
Transporters [BR:
skh02000
]
Other transporters
Others
STH12_03946 (ccmF_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CcmF_C
Cytochrom_C_asm
ResB
DUF2651
Motif
Other DBs
NCBI-ProteinID:
AZQ12988
UniProt:
A0ABN5TZY3
LinkDB
All DBs
Position
4431018..4432994
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AA seq
658 aa
AA seq
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MIPELGHFALITGLAFAILLSTVPLVGVARKDQYLVRYAWPLAYGMFLFISLSVITLGYS
FAVDDFSVAYVAHHSNSQLPSFFKIAAVWGGHEGSLLFWVFSLSVWAAAVAKFSKGLEEV
FTARVLAVLGMITVGFTLFMLLTSSPFERLFPAPMEGRDLNPMLQDVGLIFHPPMLYLGY
VGFSVSFAFAIAALLSGRLDSAWARWSRPWTLAAWIFLTGGIALGSWWAYYELGWGGWWF
WDPVENASFMPWLIGTALVHSLIVTEKRGTFRNWTVLLSIFAFSLSLLGTFIVRSGVLTS
VHSFAADPSRGMFILLLLGLAIGGSLTLFAFRASEMTSPAKFELWSKETMLLVCNLLLTV
ACGTVLLGTLYPLLIDALGMGKISVGPPYFNAVFVPIVLVMFVFMGIGPIIRWKKAKAGE
LKRQLMIPAIVSAVVGIAAPFIAGGEFNIWVALGIGTATWITLASLRAGYNAIKTNEGLS
LARLGRSQLGMIIAHLGIAVSVVGGTMVSNYSIEKSVRMGPGVSHELAGYTFKFLETKNV
VGPNYTAQQGQIEVYKGDSFVTLLKPDRRQYNVRTMDMTEAGIDWGLFRDLYVTMGDPIS
ATEYAVRLNYKPFVRWLWFGGIFMMVGGFFAASDKRYRVKVAAKDKAQQDAKGKLATA
NT seq
1977 nt
NT seq
+upstream
nt +downstream
nt
atgatcccggaacttggacactttgcgctgatcacagggctggcattcgccatcctgctc
agcaccgtgccacttgtcggggtagcacgcaaggatcaataccttgtgcgctatgcctgg
ccgttagcatacggcatgttcctttttatcagtttgtcggttatcacccttggctacagc
ttcgcggtcgatgacttctccgtagcctacgtggcgcaccattccaattcgcaacttccc
agcttcttcaagatcgccgccgtttggggtggtcacgaaggttctctgctgttctgggtg
ttctccctgtcggtctgggccgcggcggttgccaagttcagtaagggactggaagaagtc
tttaccgcccgggtactggcggtgctcggtatgattaccgtgggcttcaccctgttcatg
ctgctgacttccagcccattcgagcgcctgttcccggcgccaatggaagggcgtgacctg
aatcctatgctgcaggacgtgggtcttatcttccacccgccaatgctgtatctgggttac
gtgggcttctcggtgagctttgcgtttgcgattgcagcgctgctcagtggccgtcttgac
tctgcctgggctcgctggagccgtccgtggactctggcagcctggattttcctgaccggc
ggtatcgcgctaggttcctggtgggcttactacgagctcggctggggtggctggtggttc
tgggatccggttgagaacgcatcctttatgccatggctgattggtactgcactggtgcac
tcgctgattgtgactgagaaacgcggcaccttccgtaactggaccgtactgctgtcaatc
ttcgccttctctctgagtttgctgggtacctttatcgtacgttccggggtactgacatcg
gtgcactcatttgccgccgatcctagccgcggtatgttcattctgttgctgctcggtctt
gccattggtggctcgctcactctgttcgccttccgcgccagtgagatgaccagtccggcc
aagtttgagctttggtcgaaagaaaccatgctgctggtgtgtaacctgctgttgaccgtg
gcttgcggcactgtgctgctgggtaccctgtacccactgctgattgatgcgctgggcatg
ggtaagatttcggtaggccctccatacttcaacgcagtgtttgtgcctatcgtgctggtg
atgtttgtgttcatgggtattggccccatcatccgctggaagaaggccaaagccggtgaa
ctgaagcgtcagctgatgatccctgcgattgtgtctgcagtggtaggtattgccgcgcct
ttcatcgccggtggtgagttcaatatctgggttgccctgggtatcggtaccgcgacgtgg
atcaccctcgccagcctgcgtgccggatacaacgccatcaagaccaacgaaggcctgagc
ctggcgcgtcttggtcgcagccaactggggatgatcatcgctcacctgggtattgctgtg
tcggtagtaggtggcaccatggtgtccaactactccatcgagaagagcgtgcgcatgggt
cccggcgtcagccacgagctggccggttacaccttcaagttccttgagaccaaaaacgtg
gtgggtccaaactacaccgctcagcaaggacagattgaagtgtacaaaggtgacagcttc
gtcaccctgctcaagccggatcgtcgccagtacaacgtgcgcaccatggacatgaccgaa
gccggtatcgactggggtctgttccgtgacctgtacgtcaccatgggtgaccctatcagc
gcgaccgagtacgcggtgcgtctcaactacaagccatttgtgcgttggttgtggttcggc
ggtatcttcatgatggtgggcggtttctttgctgcctcagacaaacgctatcgtgttaag
gttgctgccaaggacaaagcgcagcaagacgccaaaggcaaattggcaactgcctga
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