Shewanella khirikhana: STH12_03973
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Entry
STH12_03973 CDS
T06711
Symbol
spoT
Name
(GenBank) Bifunctional (p)ppGpp synthase/hydrolase SpoT
KO
K01139
GTP diphosphokinase / guanosine-3',5'-bis(diphosphate) 3'-diphosphatase [EC:
2.7.6.5
3.1.7.2
]
Organism
skh
Shewanella khirikhana
Pathway
skh00230
Purine metabolism
skh01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
STH12_03973 (spoT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
skh03009
]
STH12_03973 (spoT)
Enzymes [BR:
skh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.6 Diphosphotransferases
2.7.6.5 GTP diphosphokinase
STH12_03973 (spoT)
3. Hydrolases
3.1 Acting on ester bonds
3.1.7 Diphosphoric-monoester hydrolases
3.1.7.2 guanosine-3',5'-bis(diphosphate) 3'-diphosphatase
STH12_03973 (spoT)
Ribosome biogenesis [BR:
skh03009
]
Prokaryotic type
Other maturation factors
STH12_03973 (spoT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HD_4
RelA_SpoT
TGS
ACT_4
RelA_AH_RIS
HD
ACT_AHAS_ss
ACT
TFIIS_M
Motif
Other DBs
NCBI-ProteinID:
AZQ13007
LinkDB
All DBs
Position
complement(4467336..4469435)
Genome browser
AA seq
699 aa
AA seq
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MYLFEGLKESASAYLDSGQVALLKQAYQVARDAHEGQMRTSGEPYITHPVAVAKILADMR
LDHETLMAALLHDTIEDTHVTKEDLAELFGDAVADLVEGVSKLDKLKFRDKKEAQAENFR
KMMMAMTQDIRVILIKLADRTHNMRTLGALRPDKRRRIARETLEIYAPIANRLGIHNIKT
ELEDLGFQAYYPMRYRVLREVVKAARGNRKELIANIESAVGARLEDTGIPAKVKGREKNL
YSIYNKMRSKELQFQEVMDIYAFRVIVDSIDTCYRVLGAMHGLYKPRPGRFKDYIAIPKA
NGYQSLHTSLFGPHGVPVEIQIRTEDMDQMADKGVAAHWMYKNGSENGTTTTQVRARKWM
QSLLELQQSASSSFEFVENVKTELFPDEIYVFTPEGRILELPVGATAVDFAYEVHTDVGN
TCVGARVNRQAYPLSQPLISGQTVEIITAKGAKPNAAWLNFVVTGKARAKIRQVLKNLKH
DEAITLGKRLLNHALGETKLDSISAEQLERVIQETKHKDLNSLLADIGLGNAMSIVIAQR
LLGDTVPESRGESHLMPIRGAEGMLVSFAKCCHPIPGDAVIAHVSPGKGLVVHMENCANI
RGYQGEPDKYIPVQWDKVDGVEYQANLRVEIVNHQGALAKITSIIASEGSNIHNLSTEER
DGRVYLINLRISVRDRIHLANVMRRIRVLPEVLRTSRNR
NT seq
2100 nt
NT seq
+upstream
nt +downstream
nt
ttgtatctgtttgaaggtttaaaggaatcggcttccgcttacctcgacagcggccaagtg
gcattacttaaacaggcttatcaggtcgcccgcgatgcccatgaagggcaaatgcgcacc
agtggcgaaccttatatcacccatcctgtagcagtggcgaaaattctggccgacatgcgt
ctcgatcacgagaccctgatggccgccctgctgcacgataccattgaagacacccacgtc
accaaagaagacctcgccgagctgtttggcgatgcagttgccgatttggtggaaggtgtc
tccaagctcgacaagctcaaattccgcgataaaaaagaggcccaggcggaaaacttccgc
aaaatgatgatggccatgactcaggatatccgggtcattctcatcaagctggccgaccgc
acccacaatatgcgcactctcggcgccctgcgtccggacaagcgccgtcgcatcgcccgg
gaaaccctggaaatttacgcccccatagccaaccgtctgggtattcacaatatcaagacc
gagcttgaagatctgggcttccaggcctattaccccatgcgctaccgggtgctcagggaa
gtggttaaagctgcccgcggcaaccgaaaagagcttatcgccaatattgaatccgccgtt
ggcgcccgcctcgaagacaccggcattccagccaaagtcaaaggccgggaaaagaatctc
tattccatctacaacaagatgcgcagcaaagagctgcaattccaggaagtgatggatatc
tacgcctttcgcgtcatcgtcgacagcatagatacctgttatcgggtgctgggcgccatg
catggcctgtataagccgcgccctggccgctttaaagactatatcgccattcccaaggcc
aacggttatcagtcactgcacacctccctgtttggcccccacggcgtgcctgttgaaatc
caaatccgaaccgaggatatggatcagatggccgacaaaggggttgcggcgcactggatg
tacaaaaacggcagcgaaaacggcactaccaccactcaggtgcgtgcccgtaaatggatg
caaagcctgctggagttgcagcaaagtgccagctcgtcgttcgagttcgtggaaaacgtt
aagaccgaactcttccctgacgaaatttatgtgtttactccggaaggccgcattctcgag
ctgccggtgggcgccaccgccgtggactttgcctacgaagtgcataccgacgtgggtaac
acctgtgtgggtgcgcgggtaaaccgccaggcctatccgctgagccagccgctgatttcc
ggtcaaaccgttgaaatcattacagcaaaaggcgccaaacccaacgccgcctggcttaac
tttgtagtcaccggcaaagcccgcgccaaaatccgtcaggtgctgaaaaacctcaagcac
gacgaagccattaccctgggcaaacgcctgctcaatcatgctcttggcgaaaccaagctc
gacagcatctcggcggagcagctggagcgggtgatccaggaaaccaaacataaagatttg
aacagcctgctggccgacattggccttggcaacgccatgagcatagtgatagcccagcgc
ctgcttggcgataccgtgcctgaaagtcgcggtgagtcacacctgatgcctattcgcggc
gccgaaggcatgctggtgtccttcgccaaatgttgccacccaatccccggcgatgcggtg
atcgcccatgtgagcccaggcaaaggcctggtggtgcacatggaaaactgcgccaacatc
cgtggctatcagggcgagccggacaaatacattccggtgcagtgggacaaggtcgacggc
gtcgagtatcaggccaatctgagggtagaaatcgtcaaccatcagggggctctggccaag
atcacctcaattatcgccagcgaaggctccaacattcataacctcagcaccgaggagcgg
gatggtcgggtgtatctgattaacctgcggatttcggtgcgcgatcgtatccacctggcc
aacgtgatgcggcgcatccgggtactgcccgaggtgctcagaacctcccgcaatcgctga
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