Shewanella khirikhana: STH12_04012
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Entry
STH12_04012 CDS
T06711
Symbol
slmA
Name
(GenBank) Nucleoid occlusion factor SlmA
KO
K05501
TetR/AcrR family transcriptional regulator
Organism
skh
Shewanella khirikhana
Brite
KEGG Orthology (KO) [BR:
skh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
skh03000
]
STH12_04012 (slmA)
03036 Chromosome and associated proteins [BR:
skh03036
]
STH12_04012 (slmA)
Transcription factors [BR:
skh03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
STH12_04012 (slmA)
Chromosome and associated proteins [BR:
skh03036
]
Prokaryotic type
Chromosome partitioning proteins
Inhibitors of FtsZ assembly
STH12_04012 (slmA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SlmA-like_C
TetR_N
HTH_11
HTH_AsnC-type
HTH_20
HTH_Tnp_1_2
HTH_24
HTH_23
Motif
Other DBs
NCBI-ProteinID:
AZQ13046
LinkDB
All DBs
Position
complement(4546321..4546914)
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AA seq
197 aa
AA seq
DB search
MATKEKLSRREHILQCLAQMLETNPGQRITTAKLAAEVGVSEAALYRHFPSKARMFEGLI
EFIEDSLLSRINLIMDDEKDTMRRCQLVLQLLLLFAERNPGISRVLNGDALLGENERLRS
RVSALFGKIETQLKQILREKTLREGKGFELDEAMLANLLLAVAEGRIAQYIRSEFKQKPT
EHFDEQWGFIQKQLLQS
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggccaccaaagaaaaactgagccgccgcgaacatattctccagtgtctggcacagatg
ctggaaaccaaccccggacaacgtattaccactgccaagctggccgccgaagtcggtgta
tccgaagcggcgctgtatcgccacttccccagcaaggcgcggatgtttgagggcttgata
gagtttatcgaagactcactgctgtctcgtatcaacctcatcatggatgacgagaaagac
accatgcgccgctgccaactggtattgcagctgctgctgttgtttgccgaacggaatccg
ggcatctcgcgggtactgaatggcgatgccctgctgggcgaaaatgaacgtctgcgcagc
cgcgtcagcgccctgttcggcaaaatcgaaacccagctcaagcaaatcctgcgtgagaaa
accctgcgggaaggcaagggattcgaactggatgaagccatgctggccaacctgctgctg
gcagtggccgaaggcagaatagcccagtacattcgcagcgagttcaagcaaaaacccacc
gaacacttcgatgaacagtggggctttattcagaaacaactactacaaagctag
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